RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 INSRRP14616 1297 aa29.9■■■□□ 2.38
VEGFA-207ENST00000413642 PLCB4Q15147 1175 aa29.9■■■□□ 2.38
VEGFA-207ENST00000413642 LENG9Q96B70 501 aa29.9■■■□□ 2.38
VEGFA-207ENST00000413642 PCDHA11Q9Y5I1 949 aa29.9■■■□□ 2.38
VEGFA-207ENST00000413642 BAIAP3O94812 1187 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 STAT5BP51692 787 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 NEK4P51957 841 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 WDR5P61964 334 aaKnown RBP29.89■■■□□ 2.38
VEGFA-207ENST00000413642 DEFB103AP81534 67 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 ME3Q16798 604 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 ABHD15Q6UXT9 468 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 BLIDQ8IZY5 108 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 DBF4BQ8NFT6 615 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 TRAPPC12Q8WVT3 735 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 SLC9A7Q96T83 725 aa29.89■■■□□ 2.38
VEGFA-207ENST00000413642 TET1Q8NFU7 2136 aa29.89■■■□□ 2.37
VEGFA-207ENST00000413642 M0R2N6 131 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 ANKRD1Q15327 319 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 PLPPR4Q7Z2D5 763 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 HERC6Q8IVU3 1022 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 TBCKQ8TEA7 893 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 PRDM12Q9H4Q4 367 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 SLC28A3Q9HAS3 691 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 TRPC6Q9Y210 931 aa29.88■■■□□ 2.37
VEGFA-207ENST00000413642 IGKV6D-21A0A0A0MT36 114 aa29.87■■■□□ 2.37
VEGFA-207ENST00000413642 CDKL5O76039 1030 aa29.87■■■□□ 2.37
VEGFA-207ENST00000413642 KCNJ6P48051 423 aa29.87■■■□□ 2.37
VEGFA-207ENST00000413642 SETQ01105 290 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-207ENST00000413642 C8orf34Q49A92 452 aa29.87■■■□□ 2.37
VEGFA-207ENST00000413642 CCDC60Q8IWA6 550 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-207ENST00000413642 PHOSPHO2Q8TCD6 241 aa29.87■■■□□ 2.37
VEGFA-207ENST00000413642 TUBE1Q9UJT0 475 aa29.87■■■□□ 2.37
VEGFA-207ENST00000413642 MBLAC1A4D2B0 266 aaPredicted RBP29.86■■■□□ 2.37
VEGFA-207ENST00000413642 BACH1O14867 736 aa29.86■■■□□ 2.37
VEGFA-207ENST00000413642 ARHGEF15O94989 841 aa29.86■■■□□ 2.37
VEGFA-207ENST00000413642 FOSL2P15408 326 aa29.86■■■□□ 2.37
VEGFA-207ENST00000413642 DAGLBQ8NCG7 672 aa29.86■■■□□ 2.37
VEGFA-207ENST00000413642 GJA10Q969M2 543 aa29.86■■■□□ 2.37
VEGFA-207ENST00000413642 ABHD14A-ACY1A0A1B0GW23 586 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 MSH4O15457 936 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 EIF5BO60841 1220 aaKnown RBP29.85■■■□□ 2.37
VEGFA-207ENST00000413642 CAND2O75155 1236 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 CHRNA1P02708 482 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 CA3P07451 260 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 USP11P51784 963 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 IKBKEQ14164 716 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 SWSAP1Q6NVH7 229 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.85■■■□□ 2.372e-35■■■■■ 28
VEGFA-207ENST00000413642 DNAJB3Q8WWF6 145 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 TBC1D22BQ9NU19 505 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 STK36Q9NRP7 1315 aa29.85■■■□□ 2.37
VEGFA-207ENST00000413642 TDP2O95551 362 aa29.84■■■□□ 2.37
VEGFA-207ENST00000413642 FDPSP14324 419 aaKnown RBP29.84■■■□□ 2.37
VEGFA-207ENST00000413642 PLEKHG4Q58EX7 1191 aa29.84■■■□□ 2.37
VEGFA-207ENST00000413642 FAM26DQ5JW98 314 aa29.84■■■□□ 2.37
VEGFA-207ENST00000413642 PPP2R2DQ66LE6 453 aa29.84■■■□□ 2.37
VEGFA-207ENST00000413642 SLC17A8Q8NDX2 589 aa29.84■■■□□ 2.37
VEGFA-207ENST00000413642 PHF20Q9BVI0 1012 aa29.84■■■□□ 2.37
VEGFA-207ENST00000413642 ORC3Q9UBD5 711 aaPredicted RBP29.84■■■□□ 2.37
VEGFA-207ENST00000413642 POTEB3A0JP26 581 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 ATP4AP20648 1035 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 MIS18BP1Q6P0N0 1132 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 TAF2Q6P1X5 1199 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 POTEBQ6S5H4 581 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 GTF3C6Q969F1 213 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 FAM49AQ9H0Q0 323 aaPredicted RBP29.83■■■□□ 2.37
VEGFA-207ENST00000413642 ZNF302Q9NR11 478 aa29.83■■■□□ 2.37
VEGFA-207ENST00000413642 RRN3P2A6NIE6 340 aa29.82■■■□□ 2.36
VEGFA-207ENST00000413642 GALNT17Q6IS24 598 aa29.82■■■□□ 2.36
VEGFA-207ENST00000413642 FAM117BQ6P1L5 589 aa29.82■■■□□ 2.36
VEGFA-207ENST00000413642 MAFAQ8NHW3 353 aaPredicted RBP29.82■■■□□ 2.36
VEGFA-207ENST00000413642 OXER1Q8TDS5 423 aa29.82■■■□□ 2.36
VEGFA-207ENST00000413642 MGAT3Q09327 533 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 ST3GAL1Q11201 340 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 MKRN4PQ13434 485 aaPredicted RBP29.81■■■□□ 2.36
VEGFA-207ENST00000413642 ADGRE1Q14246 886 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 INF2Q27J81 1249 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 FAM160B1Q5W0V3 765 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 ZNF746Q6NUN9 644 aaPredicted RBP29.81■■■□□ 2.36
VEGFA-207ENST00000413642 PDXDC2PQ6P474 469 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 TRMT1LQ7Z2T5 733 aaKnown RBP29.81■■■□□ 2.36
VEGFA-207ENST00000413642 RPAINQ86UA6 219 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 SEPT8Q92599 483 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 CERS4Q9HA82 394 aa29.81■■■□□ 2.36
VEGFA-207ENST00000413642 LCHNA4D1U4 455 aa29.8■■■□□ 2.36
VEGFA-207ENST00000413642 KRT76Q01546 638 aa29.8■■■□□ 2.36
VEGFA-207ENST00000413642 NONOQ15233 471 aaKnown RBP eCLIP29.8■■■□□ 2.363e-6■■■□□ 16.3
VEGFA-207ENST00000413642 SPRED2Q7Z698 418 aa29.8■■■□□ 2.36
VEGFA-207ENST00000413642 FAM177A1Q8N128 213 aaPredicted RBP29.8■■■□□ 2.36
VEGFA-207ENST00000413642 ATP8B4Q8TF62 1192 aa29.8■■■□□ 2.36
VEGFA-207ENST00000413642 SLC5A5Q92911 643 aa29.8■■■□□ 2.36
VEGFA-207ENST00000413642 C22orf23Q9BZE7 217 aa29.8■■■□□ 2.36
VEGFA-207ENST00000413642 TLL1O43897 1013 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 JAK2O60674 1132 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 GHRP10912 638 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 SLC26A2P50443 739 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 TMEM62Q0P6H9 643 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 KRT25Q7Z3Z0 450 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 NSUN7Q8NE18 718 aaKnown RBP29.79■■■□□ 2.36
VEGFA-207ENST00000413642 ZBED2Q9BTP6 218 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms