RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PPP2R3CQ969Q6 453 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 UBAC1Q9BSL1 405 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 FAM86C1Q9NVL1 165 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
RFFL-203ENST00000413582 MAD2L2Q9UI95 211 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 BARX2Q9UMQ3 279 aaPredicted RBP11.06□□□□□ -0.64
RFFL-203ENST00000413582 USP15Q9Y4E8 981 aaPredicted RBP11.06□□□□□ -0.64
RFFL-203ENST00000413582 GVINP1Q7Z2Y8 2422 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
RFFL-203ENST00000413582 GFRA3O60609 400 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 STAM2O75886 525 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 VCPP55072 806 aaKnown RBP11.05□□□□□ -0.64
RFFL-203ENST00000413582 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
RFFL-203ENST00000413582 SIGLEC14Q08ET2 396 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 SEC23AQ15436 765 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 FBXO47Q5MNV8 452 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 IFIT1BQ5T764 474 aaKnown RBP11.05□□□□□ -0.64
RFFL-203ENST00000413582 UTP14CQ5TAP6 766 aaKnown RBP11.05□□□□□ -0.64
RFFL-203ENST00000413582 TSHZ1Q6ZSZ6 1077 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 CRIPAKQ8N1N5 446 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 SPPL3Q8TCT6 385 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 ASIC4Q96FT7 647 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 PIGSQ96S52 555 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
RFFL-203ENST00000413582 FNDC1Q4ZHG4 1894 aaPredicted RBP11.04□□□□□ -0.64
RFFL-203ENST00000413582 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
RFFL-203ENST00000413582 CYTH3O43739 400 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 SDSP20132 328 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 NRIP1P48552 1158 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 SP4Q02446 784 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 PPFIA1Q13136 1202 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 NAALADL2Q58DX5 795 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 KLHL23Q8NBE8 558 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 POF1BQ8WVV4 589 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 RILPL2Q969X0 211 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 PHF7Q9BWX1 381 aaPredicted RBP11.04□□□□□ -0.64
RFFL-203ENST00000413582 KRT23Q9C075 422 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 RIOX1Q9H6W3 641 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 AGO3Q9H9G7 860 aaKnown RBP11.04□□□□□ -0.64
RFFL-203ENST00000413582 TUBE1Q9UJT0 475 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 CDY2AQ9Y6F7 541 aa11.04□□□□□ -0.64
RFFL-203ENST00000413582 CD52P31358 61 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 MRPS6P82932 125 aaKnown RBP11.03□□□□□ -0.64
RFFL-203ENST00000413582 TRAF1Q13077 416 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 GRM4Q14833 912 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 GRIK4Q16099 956 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 IMMTQ16891 758 aaKnown RBP11.03□□□□□ -0.64
RFFL-203ENST00000413582 PAN2Q504Q3 1202 aaKnown RBP11.03□□□□□ -0.64
RFFL-203ENST00000413582 MARCH8Q5T0T0 291 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 RBM23Q86U06 439 aaKnown RBP11.03□□□□□ -0.64
RFFL-203ENST00000413582 RSPH3Q86UC2 560 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 DNAJB3Q8WWF6 145 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 SUSD6Q92537 303 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 SENP7Q9BQF6 1050 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 DSCC1Q9BVC3 393 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 CNNM2Q9H8M5 875 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 MYO15AQ9UKN7 3530 aa11.03□□□□□ -0.64
RFFL-203ENST00000413582 PNMA6FA0A0J9YX94 578 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 ATF7P17544 494 aaPredicted RBP11.02□□□□□ -0.65
RFFL-203ENST00000413582 MARK3P27448 753 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 TCF7P36402 384 aaPredicted RBP11.02□□□□□ -0.65
RFFL-203ENST00000413582 GATMP50440 423 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 RBM10P98175 930 aaKnown RBP11.02□□□□□ -0.65
RFFL-203ENST00000413582 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
RFFL-203ENST00000413582 PCNX4Q63HM2 1172 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 CWC27Q6UX04 472 aaKnown RBP11.02□□□□□ -0.65
RFFL-203ENST00000413582 CYB5R4Q7L1T6 521 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 RTN4RL1Q86UN2 441 aaPredicted RBP11.02□□□□□ -0.65
RFFL-203ENST00000413582 VN1R2Q8NFZ6 395 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 ATP8B4Q8TF62 1192 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 ZBTB10Q96DT7 871 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 RPGRIP1Q96KN7 1286 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 MYO10Q9HD67 2058 aa11.02□□□□□ -0.65
RFFL-203ENST00000413582 CACNA1AO00555 2505 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 KCNA2P16389 499 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 AVPR2P30518 371 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 PTPN21Q16825 1174 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 FTHL17Q9BXU8 183 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 DIAPH3Q9NSV4 1193 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 ERAP1Q9NZ08 941 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 SQORQ9Y6N5 450 aa11.01□□□□□ -0.65
RFFL-203ENST00000413582 DCHS1Q96JQ0 3298 aa11□□□□□ -0.65
RFFL-203ENST00000413582 GSTTP1A0A1W2PQM5 241 aa11□□□□□ -0.65
RFFL-203ENST00000413582 PER2O15055 1255 aa11□□□□□ -0.65
RFFL-203ENST00000413582 ATP9AO75110 1047 aa11□□□□□ -0.65
RFFL-203ENST00000413582 PDGFBP01127 241 aaPredicted RBP11□□□□□ -0.65
RFFL-203ENST00000413582 RPLP2P05387 115 aaKnown RBP11□□□□□ -0.65
RFFL-203ENST00000413582 STAG3L1P0CL83 205 aa11□□□□□ -0.65
RFFL-203ENST00000413582 SCG2P13521 617 aa11□□□□□ -0.65
RFFL-203ENST00000413582 XRRA1Q6P2D8 792 aa11□□□□□ -0.65
RFFL-203ENST00000413582 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
RFFL-203ENST00000413582 GIMAP8Q8ND71 665 aaPredicted RBP11□□□□□ -0.65
RFFL-203ENST00000413582 ATOH1Q92858 354 aaPredicted RBP11□□□□□ -0.65
RFFL-203ENST00000413582 GPRASP2Q96D09 838 aa11□□□□□ -0.65
RFFL-203ENST00000413582 FAM49AQ9H0Q0 323 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms