RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ABHD15Q6UXT9 468 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 LRRC8DQ7L1W4 858 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 C16orf59Q7L2K0 433 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 NEK8Q86SG6 692 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 RSPH1Q8WYR4 309 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 JPH2Q9BR39 696 aaPredicted RBP7.24□□□□□ -1.25
USP54-202ENST00000413442 PPP1R12CQ9BZL4 782 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 NCOA5Q9HCD5 579 aaKnown RBP7.24□□□□□ -1.25
USP54-202ENST00000413442 PCDHA2Q9Y5H9 948 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 PCDHA11Q9Y5I1 949 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 MAFBQ9Y5Q3 323 aaPredicted RBP7.24□□□□□ -1.25
USP54-202ENST00000413442 STK24Q9Y6E0 443 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 POTEB3A0JP26 581 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 WDR64B1ANS9 1081 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 FAM86B1E9PN63 330 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 M0QZ92 97 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 FAM86B2P0C5J1 330 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 ARP10275 920 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 CYP2C9P11712 490 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 XRCC6P12956 609 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP54-202ENST00000413442 TMOD1P28289 359 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 KCNJ6P48051 423 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 CCL23P55773 120 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 STK3Q13188 491 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 ME3Q16798 604 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 TRIM71Q2Q1W2 868 aaKnown RBP7.23□□□□□ -1.25
USP54-202ENST00000413442 C8orf34Q49A92 452 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 POTEBQ6S5H4 581 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 TBCKQ8TEA7 893 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 SEPT8Q92599 483 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 SLC5A5Q92911 643 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 TEKT3Q9BXF9 490 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 FTHL17Q9BXU8 183 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 FTOQ9C0B1 505 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP54-202ENST00000413442 WNT8AQ9H1J5 351 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 SLC28A3Q9HAS3 691 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 ZNF302Q9NR11 478 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 VPS54Q9P1Q0 977 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 STXBP5LQ9Y2K9 1186 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 KDM3AQ9Y4C1 1321 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 WDR81Q562E7 1941 aa7.23□□□□□ -1.25
USP54-202ENST00000413442 TANC1Q9C0D5 1861 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 DOCK5Q9H7D0 1870 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 CARNS1A5YM72 827 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 GAS2O43903 313 aaKnown RBP7.22□□□□□ -1.25
USP54-202ENST00000413442 GAS7O60861 476 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 SEC24BO95487 1268 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 ZNF286BP0CG31 522 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 INSRRP14616 1297 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 MUTP22033 750 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 KRT2P35908 639 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 TRAPPC10P48553 1259 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 DNM2P50570 870 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 EPHB4P54760 987 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 PPFIA1Q13136 1202 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 GRIK4Q16099 956 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 PRR16Q569H4 304 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 PLEKHG4Q58EX7 1191 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 C9orf50Q5SZB4 431 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 UTP14CQ5TAP6 766 aaKnown RBP7.22□□□□□ -1.25
USP54-202ENST00000413442 PDXDC2PQ6P474 469 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 OTUD6AQ7L8S5 288 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 DEFB123Q8N688 67 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 CYP2W1Q8TAV3 490 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 ATP8B4Q8TF62 1192 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 SAMD11Q96NU1 681 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 CTAGE1Q96RT6 745 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 NIFKQ9BYG3 293 aaKnown RBP7.22□□□□□ -1.25
USP54-202ENST00000413442 FOXP1Q9H334 677 aaPredicted RBP7.22□□□□□ -1.25
USP54-202ENST00000413442 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 SETD4Q9NVD3 440 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 TMEM260Q9NX78 707 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 MTMR10Q9NXD2 777 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 LMCD1Q9NZU5 365 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 TUBE1Q9UJT0 475 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 SAMM50Q9Y512 469 aa7.22□□□□□ -1.25
USP54-202ENST00000413442 BACH1O14867 736 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 MSH4O15457 936 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 TREHO43280 583 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 MARCH6O60337 910 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 PSMD10O75832 226 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 CTDNEP1O95476 244 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 MMP1P03956 469 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 AMHP03971 560 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 P4HBP07237 508 aaKnown RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 FDPSP14324 419 aaKnown RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 ATP2A2P16615 1042 aaKnown RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 POU3F3P20264 500 aaPredicted RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 KLRC1P26715 233 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 THPOP40225 353 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 CHMP4BP1P59074 171 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 ITGB3BPQ13352 177 aaPredicted RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 PPP2R5CQ13362 524 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 PLCB4Q15147 1175 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 PCBP1Q15365 356 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP54-202ENST00000413442 NPY5RQ15761 445 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 XKR3Q5GH77 459 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 ZNF618Q5T7W0 954 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms