RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 MCM8Q9UJA3 840 aa14.34□□□□□ -0.11
LITAF-203ENST00000413364 VAV3Q9UKW4 847 aa14.34□□□□□ -0.11
LITAF-203ENST00000413364 IGLV3-22A0A075B6J6 115 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 CYP11B2P19099 503 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 TNFAIP1Q13829 316 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 MIIPQ5JXC2 388 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 POTEGQ6S5H5 508 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 POTEEQ6S8J3 1075 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 CATSPER3Q86XQ3 398 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 MYOCDQ8IZQ8 938 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 TBC1D5Q92609 795 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 TEPSINQ96N21 525 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 VPS18Q9P253 973 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 CAPN11Q9UMQ6 739 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 BRCA1P38398 1863 aaKnown RBP14.33□□□□□ -0.12
LITAF-203ENST00000413364 ABCB11O95342 1321 aa14.33□□□□□ -0.12
LITAF-203ENST00000413364 TTC26A0AVF1 554 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 TADA3O75528 432 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 SPATA31C1P0DKV0 1188 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 SLC12A3P55017 1021 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 ERVK-24P63145 666 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 TBC1D8BQ0IIM8 1120 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 GRIK3Q13003 919 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 ANKRD23Q86SG2 305 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 RETREG2Q8NC44 543 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 CYP2W1Q8TAV3 490 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 TSG101Q99816 390 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
LITAF-203ENST00000413364 ACBD3Q9H3P7 528 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 EHMT1Q9H9B1 1298 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 MRPL44Q9H9J2 332 aaKnown RBP14.32□□□□□ -0.12
LITAF-203ENST00000413364 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 MAP2K7O14733 419 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 PTGER2P43116 358 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 LRRC41Q15345 812 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 FOXR1Q6PIV2 292 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 LRRC31Q6UY01 552 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 CCDC84Q86UT8 332 aaPredicted RBP14.32□□□□□ -0.12
LITAF-203ENST00000413364 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 CCDC125Q86Z20 511 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 GLIS3Q8NEA6 775 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 ARMC2Q8NEN0 867 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 OR8K1Q8NGG5 319 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 DNAJC7Q99615 494 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 JPH2Q9BR39 696 aaPredicted RBP14.32□□□□□ -0.12
LITAF-203ENST00000413364 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 ZNF341Q9BYN7 854 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 CPSF2Q9P2I0 782 aaKnown RBP14.32□□□□□ -0.12
LITAF-203ENST00000413364 DNM3Q9UQ16 869 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 LUC7L2Q9Y383 392 aaKnown RBP14.32□□□□□ -0.12
LITAF-203ENST00000413364 PCDHA2Q9Y5H9 948 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 PITPNM2Q9BZ72 1349 aa14.32□□□□□ -0.12
LITAF-203ENST00000413364 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 FANCGO15287 622 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 EGFRP00533 1210 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 ARSHQ5FYA8 562 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 ERGIC2Q96RQ1 377 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
LITAF-203ENST00000413364 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 GNG11P61952 73 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 ZCWPW2Q504Y3 356 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 FKBP15Q5T1M5 1219 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 KCNV1Q6PIU1 500 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 N4BP2L2Q92802 583 aaPredicted RBP14.31□□□□□ -0.12
LITAF-203ENST00000413364 KAT2BQ92831 832 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 CABS1Q96KC9 395 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 WDR18Q9BV38 432 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 TTYH3Q9C0H2 523 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 DEFB129Q9H1M3 183 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
LITAF-203ENST00000413364 RPS6KL1Q9Y6S9 549 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 LTBP3Q9NS15 1303 aa14.31□□□□□ -0.12
LITAF-203ENST00000413364 A0A1B0GUA9 196 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 RASSF10A6NK89 507 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 CHUKO15111 745 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
LITAF-203ENST00000413364 PAX7P23759 505 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 INPP5BP32019 993 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 RBBP5Q15291 538 aaKnown RBP14.3□□□□□ -0.12
LITAF-203ENST00000413364 VWA3BQ502W6 1294 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 HERC4Q5GLZ8 1057 aaPredicted RBP14.3□□□□□ -0.12
LITAF-203ENST00000413364 KCTD17Q8N5Z5 321 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 SYT2Q8N9I0 419 aaPredicted RBP14.3□□□□□ -0.12
LITAF-203ENST00000413364 LPAR1Q92633 364 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
LITAF-203ENST00000413364 CCDC151A5D8V7 595 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 H3BQF6 201 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 MEIS1O00470 390 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 WDR46O15213 610 aaKnown RBP14.3□□□□□ -0.12
LITAF-203ENST00000413364 ICAM1P05362 532 aa14.3□□□□□ -0.12
LITAF-203ENST00000413364 GMPSP49915 693 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms