RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PTK2Q05397 1052 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 KCNH2Q12809 1159 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 CCDC121Q6ZUS5 278 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 SCFD1Q8WVM8 642 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 HAS1Q92839 578 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 DDX25Q9UHL0 483 aaKnown RBP19.29■□□□□ 0.68
SDCBP-202ENST00000413219 LEMD3Q9Y2U8 911 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 PLIN4Q96Q06 1357 aa19.29■□□□□ 0.68
SDCBP-202ENST00000413219 ADAM9Q13443 819 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 SPDYCQ5MJ68 293 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 DPY19L2P1Q6NXN4 242 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-202ENST00000413219 FRMD5Q7Z6J6 570 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 SLFN11Q7Z7L1 901 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 SEC14L1Q92503 715 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 COA7Q96BR5 231 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 NAGPAQ9UK23 515 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 INTUQ9ULD6 942 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 NENFQ9UMX5 172 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 NHSQ6T4R5 1651 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 GOLGA6L7A0A1B0GV03 622 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 FRMD3A2A2Y4 597 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 PLCG2P16885 1265 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 MAP2K2P36507 400 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 TNNI2P48788 182 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 CLK2P49760 499 aaKnown RBP19.28■□□□□ 0.68
SDCBP-202ENST00000413219 PPP2R2AP63151 447 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 NELFCDQ8IXH7 590 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 MARCH10Q8NA82 808 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-202ENST00000413219 TPCN2Q8NHX9 752 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 P3H4Q92791 437 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 FGFBP2Q9BYJ0 223 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 PPANQ9NQ55 473 aaKnown RBP19.28■□□□□ 0.68
SDCBP-202ENST00000413219 KLC4Q9NSK0 619 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 EMILIN3Q9NT22 766 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 SUCLA2Q9P2R7 463 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-202ENST00000413219 NOC2LQ9Y3T9 749 aaKnown RBP19.28■□□□□ 0.68
SDCBP-202ENST00000413219 PITPNM2Q9BZ72 1349 aa19.28■□□□□ 0.68
SDCBP-202ENST00000413219 COL16A1Q07092 1604 aaPredicted RBP19.27■□□□□ 0.68
SDCBP-202ENST00000413219 COL24A1Q17RW2 1714 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 KIF13BQ9NQT8 1826 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 FLOT1O75955 427 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 NPEPPSP55786 919 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 TAX1BP1Q86VP1 789 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 SYCE1Q8N0S2 351 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 METTL13Q8N6R0 699 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 CCDC26Q8TAB7 109 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 FBXL5Q9UKA1 691 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 PCDHA12Q9UN75 941 aa19.27■□□□□ 0.68
SDCBP-202ENST00000413219 GPR75-ASB3A0A0A6YYF3 556 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 PLA2G4BP0C869 781 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 SNHG28P0DPA3 235 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 TM4SF1P30408 202 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 BTDP43251 543 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 HSPA2P54652 639 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 GRIK5Q16478 980 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 HERC4Q5GLZ8 1057 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 ALKBH5Q6P6C2 394 aaKnown RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 NBPF5PQ86XG9 351 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 TEX11Q8IYF3 940 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 LINC00116Q8NCU8 138 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 SPAG5Q96R06 1193 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 SETDB2Q96T68 719 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 CENPHQ9H3R5 247 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 FAM114A2Q9NRY5 505 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 DDX20Q9UHI6 824 aaKnown RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 STXBP5LQ9Y2K9 1186 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 CNTNAP4Q9C0A0 1308 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 PNMA6FA0A0J9YX94 578 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 KRIT1O00522 736 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 SSBP05455 408 aaKnown RBP eCLIP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 UCHL3P15374 230 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 ENOX2Q16206 610 aaKnown RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 C15orf52Q6ZUT6 534 aaKnown RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 ZNF804AQ7Z570 1209 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 GPBP1Q86WP2 473 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 NEUROG2Q9H2A3 272 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 TBC1D7Q9P0N9 293 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 TTC7AQ9ULT0 858 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-202ENST00000413219 TRAF3IP3Q9Y228 551 aa19.26■□□□□ 0.67
SDCBP-202ENST00000413219 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 MARCH6O60337 910 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 AFPP02771 609 aaKnown RBP19.25■□□□□ 0.67
SDCBP-202ENST00000413219 CYP11B2P19099 503 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 TMC3Q7Z5M5 1100 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 VPS36Q86VN1 386 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 OR2W6PQ8NHA6 318 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 SLC40A1Q9NP59 571 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 SWAP70Q9UH65 585 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 CDK5RAP2Q96SN8 1893 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
SDCBP-202ENST00000413219 NR2F2P24468 414 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 MRPL12P52815 198 aaKnown RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 EIF3BP55884 814 aaKnown RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 LACTB2Q53H82 288 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 PEX26Q7Z412 305 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 DDX42Q86XP3 938 aaKnown RBP eCLIP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 CCDC50Q8IVM0 306 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 UBLCP1Q8WVY7 318 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms