RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 MKRN4PQ13434 485 aaPredicted RBP25.46■■□□□ 1.67
MSH6-202ENST00000411819 JAKMIP3Q5VZ66 844 aa25.46■■□□□ 1.67
MSH6-202ENST00000411819 TRPC6Q9Y210 931 aa25.46■■□□□ 1.67
MSH6-202ENST00000411819 TTC28Q96AY4 2481 aa25.46■■□□□ 1.67
MSH6-202ENST00000411819 PSMA5P28066 241 aa25.45■■□□□ 1.66
MSH6-202ENST00000411819 ACTR2P61160 394 aa25.45■■□□□ 1.66
MSH6-202ENST00000411819 FAM26DQ5JW98 314 aa25.45■■□□□ 1.66
MSH6-202ENST00000411819 APBB2Q92870 758 aa25.45■■□□□ 1.66
MSH6-202ENST00000411819 PCYT2Q99447 389 aa25.45■■□□□ 1.66
MSH6-202ENST00000411819 AGO4Q9HCK5 861 aaKnown RBP25.45■■□□□ 1.66
MSH6-202ENST00000411819 NID2Q14112 1375 aa25.44■■□□□ 1.66
MSH6-202ENST00000411819 DDX39AO00148 427 aaKnown RBP25.44■■□□□ 1.66
MSH6-202ENST00000411819 UPP2O95045 317 aa25.44■■□□□ 1.66
MSH6-202ENST00000411819 GHRP10912 638 aa25.44■■□□□ 1.66
MSH6-202ENST00000411819 ITGB3BPQ13352 177 aaPredicted RBP25.44■■□□□ 1.66
MSH6-202ENST00000411819 CCDC12Q8WUD4 166 aaPredicted RBP25.44■■□□□ 1.66
MSH6-202ENST00000411819 DNAJB3Q8WWF6 145 aa25.44■■□□□ 1.66
MSH6-202ENST00000411819 YME1L1Q96TA2 773 aa25.44■■□□□ 1.66
MSH6-202ENST00000411819 TRANK1O15050 2925 aa25.44■■□□□ 1.66
MSH6-202ENST00000411819 LPXNO60711 386 aa25.43■■□□□ 1.66
MSH6-202ENST00000411819 CHRNA1P02708 482 aa25.43■■□□□ 1.66
MSH6-202ENST00000411819 INSRRP14616 1297 aa25.43■■□□□ 1.66
MSH6-202ENST00000411819 ERVK-21P61565 698 aa25.43■■□□□ 1.66
MSH6-202ENST00000411819 AKAP17AQ02040 695 aaKnown RBP25.43■■□□□ 1.66
MSH6-202ENST00000411819 PHKBQ93100 1093 aa25.43■■□□□ 1.66
MSH6-202ENST00000411819 FAM49AQ9H0Q0 323 aaPredicted RBP25.43■■□□□ 1.66
MSH6-202ENST00000411819 C6orf50Q9HD87 102 aa25.43■■□□□ 1.66
MSH6-202ENST00000411819 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.42■■□□□ 1.66
MSH6-202ENST00000411819 MBLAC1A4D2B0 266 aaPredicted RBP25.42■■□□□ 1.66
MSH6-202ENST00000411819 RRN3P2A6NIE6 340 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 MEIS1O00470 390 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 PPFIA3O75145 1194 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 HTRA4P83105 476 aaPredicted RBP25.42■■□□□ 1.66
MSH6-202ENST00000411819 TFF2Q03403 129 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 MARCH8Q5T0T0 291 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 RPAINQ86UA6 219 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 PLA2G4DQ86XP0 818 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 REXO1Q8N1G1 1221 aaKnown RBP25.42■■□□□ 1.66
MSH6-202ENST00000411819 ADAMTS19Q8TE59 1207 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 TNPO1Q92973 898 aaKnown RBP25.42■■□□□ 1.66
MSH6-202ENST00000411819 ZBTB10Q96DT7 871 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 SUGCTQ9HAC7 445 aa25.42■■□□□ 1.66
MSH6-202ENST00000411819 ESYT2A0FGR8 921 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 NEFLP07196 543 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 STAT5BP51692 787 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 MGAT3Q09327 533 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 PLCB4Q15147 1175 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 FBXO22Q8NEZ5 403 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 TOP1MTQ969P6 601 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 C17orf80Q9BSJ5 609 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 ZMYND12Q9H0C1 365 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 CDY2AQ9Y6F7 541 aa25.41■■□□□ 1.66
MSH6-202ENST00000411819 NLRC5Q86WI3 1866 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 FAM86B1E9PN63 330 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 BACH1O14867 736 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 PRPF3O43395 683 aaKnown RBP25.4■■□□□ 1.66
MSH6-202ENST00000411819 FAM86B2P0C5J1 330 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 LPIN1Q14693 890 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 PKN1Q16512 942 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 AAK1Q2M2I8 961 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 NIPA1Q7RTP0 329 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 PLPPR4Q7Z2D5 763 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 SP7Q8TDD2 431 aaPredicted RBP25.4■■□□□ 1.66
MSH6-202ENST00000411819 TRAPPC12Q8WVT3 735 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 UIMC1Q96RL1 719 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 SLC26A6Q9BXS9 759 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 AGXT2Q9BYV1 514 aa25.4■■□□□ 1.66
MSH6-202ENST00000411819 TCF20Q9UGU0 1960 aaKnown RBP25.4■■□□□ 1.66
MSH6-202ENST00000411819 TNFRSF10AO00220 468 aa25.39■■□□□ 1.66
MSH6-202ENST00000411819 GNA11P29992 359 aa25.39■■□□□ 1.66
MSH6-202ENST00000411819 CCT2P78371 535 aaKnown RBP25.39■■□□□ 1.66
MSH6-202ENST00000411819 MRPS6P82932 125 aaKnown RBP25.39■■□□□ 1.66
MSH6-202ENST00000411819 FBXL16Q8N461 479 aa25.39■■□□□ 1.66
MSH6-202ENST00000411819 UHRF1Q96T88 793 aaPredicted RBP25.39■■□□□ 1.66
MSH6-202ENST00000411819 REV3LO60673 3130 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 POTEB3A0JP26 581 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 M0QZ92 97 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 ADAMTS3O15072 1205 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 RPLP2P05387 115 aaKnown RBP25.38■■□□□ 1.65
MSH6-202ENST00000411819 FBXO47Q5MNV8 452 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 FAM160B1Q5W0V3 765 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 MCTP2Q6DN12 878 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 POTEBQ6S5H4 581 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 CCDC148Q8NFR7 591 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 RASGRP4Q8TDF6 673 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 RNF26Q9BY78 433 aaPredicted RBP25.38■■□□□ 1.65
MSH6-202ENST00000411819 NCOA5Q9HCD5 579 aaKnown RBP25.38■■□□□ 1.65
MSH6-202ENST00000411819 LMCD1Q9NZU5 365 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 COG5Q9UP83 839 aa25.38■■□□□ 1.65
MSH6-202ENST00000411819 LOXHD1Q8IVV2 1947 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 COL4A6Q14031 1691 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 CCNE2O96020 404 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 CYP3A4P08684 503 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 KCNQ1P51787 676 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 SETQ01105 290 aaPredicted RBP25.37■■□□□ 1.65
MSH6-202ENST00000411819 TMEM62Q0P6H9 643 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 TSHZ1Q6ZSZ6 1077 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 ZNF577Q9BSK1 485 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 TCEAL9Q9UHQ7 104 aa25.37■■□□□ 1.65
MSH6-202ENST00000411819 IGLV3-22A0A075B6J6 115 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms