RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PDE6BP35913 854 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 RGS2P41220 211 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 DGUOKQ16854 277 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 WDR93Q6P2C0 686 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 FAM47EQ6ZV65 393 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SEPT1Q8WYJ6 367 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 PAIP1Q9H074 479 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SLC6A15Q9H2J7 730 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SMG6Q86US8 1419 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 UBE4BO95155 1302 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SPTLC1O15269 473 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 DHX15O43143 795 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ANP32DO95626 131 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 EPB41P11171 864 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 RPS2P15880 293 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CHRNA2Q15822 529 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SYCP2LQ5T4T6 812 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CCDC24Q8N4L8 307 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 EPS8L2Q9H6S3 715 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 DACT1Q9NYF0 836 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ANGPT4Q9Y264 503 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 KCNIP3Q9Y2W7 256 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TARSL2A2RTX5 802 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 BIN1O00499 593 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 BAIAP3O94812 1187 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 IFIT1P09914 478 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM49P0CI25 452 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM49CP0CI26 452 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TNNI2P48788 182 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 NPY2RP49146 381 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 DMPKQ09013 629 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM32Q13049 653 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 DCTN2Q13561 401 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 BBS9Q3SYG4 887 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 KLHL29Q96CT2 875 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SPOCK3Q9BQ16 436 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 EPB41L5Q9HCM4 733 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 VPS54Q9P1Q0 977 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ATP6V1HQ9UI12 483 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 KIF27Q86VH2 1401 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CASC3O15234 703 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 PJA2O43164 708 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 PRMT3O60678 531 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TMCC2O75069 709 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 NPR2P20594 1047 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CIITAP33076 1130 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 STAT6P42226 847 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 STK4Q13043 487 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ITGB3BPQ13352 177 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SMCO1Q147U7 214 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SARM1Q6SZW1 724 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 METTL13Q8N6R0 699 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 GPN3Q9UHW5 284 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 GSAPA4D1B5 854 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 GYG2O15488 501 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 EEF1GP26641 437 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 NCKAP1LP55160 1127 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 LBRQ14739 615 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 COG2Q14746 738 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 IYDQ6PHW0 289 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 THRSPQ92748 146 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TMX1Q9H3N1 280 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 METTL14Q9HCE5 456 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 EHD3Q9NZN3 535 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 SMIM31A0A1B0GVY4 71 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM24O15164 1050 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 CCT5P48643 541 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 UBASH3AP57075 661 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 C2orf76Q3KRA6 126 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 LACTB2Q53H82 288 aaPredicted RBP4.9□□□□□ -1.62
PTPN13-202ENST00000411767 CAVIN4Q5BKX8 364 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 BTNL9Q6UXG8 535 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 BEND4Q6ZU67 534 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 THAP5Q7Z6K1 395 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 SCYL3Q8IZE3 742 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 BHMTQ93088 406 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM2Q9C040 744 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 TMCO1Q9UM00 188 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 GPC6Q9Y625 555 aaPredicted RBP4.9□□□□□ -1.62
PTPN13-202ENST00000411767 CEP162Q5TB80 1403 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 ZNF891A8MT65 544 aaPredicted RBP4.9□□□□□ -1.62
PTPN13-202ENST00000411767 SASH1O94885 1247 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 ZCCHC18P0CG32 403 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 ATF7P17544 494 aaPredicted RBP4.9□□□□□ -1.62
PTPN13-202ENST00000411767 TNFAIP3P21580 790 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 CHMP24386 653 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 CHRNA3P32297 505 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 HNRNPMP52272 730 aaKnown RBP eCLIP4.9□□□□□ -1.62
PTPN13-202ENST00000411767 PKN2Q16513 984 aaKnown RBP4.9□□□□□ -1.62
PTPN13-202ENST00000411767 BTBD8Q5XKL5 378 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 WAPLQ7Z5K2 1190 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 RRP7BPQ9NSQ0 103 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 DNAJC12Q9UKB3 198 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 ATP5J2-PTCD1G3V325 749 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 RIMBP2O15034 1052 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 VILLO15195 856 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 CAND2O75155 1236 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 SUPT7LO94864 414 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 PDHA2P29803 388 aa4.9□□□□□ -1.62
PTPN13-202ENST00000411767 YWHABP31946 246 aaKnown RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms