RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 IL12RB1P42701 662 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CORO7P57737 925 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 OCRLQ01968 901 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CHRNA2Q15822 529 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DPY19L1Q2PZI1 675 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TRIM61Q5EBN2 209 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FAM26FQ5R3K3 315 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CRTC3Q6UUV7 619 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 USP53Q70EK8 1073 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FBXO41Q8TF61 875 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DIO2Q92813 273 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DDX11Q96FC9 970 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SCYL1Q96KG9 808 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 WWC2-AS2Q96NR7 200 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SEMA4AQ9H3S1 761 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CAAP1Q9H8G2 361 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CABP5Q9NP86 173 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GPR27Q9NS67 375 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NDOR1Q9UHB4 597 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZFR2Q9UPR6 939 aaKnown RBP3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MAPRE3Q9UPY8 281 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 COA3Q9Y2R0 106 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TESMINQ9Y4I5 508 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SBNO2Q9Y2G9 1366 aa3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 POLA1P09884 1462 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ADCY3O60266 1144 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 B4GALT3O60512 393 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CDK11BP21127 795 aaKnown RBP3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TACR1P25103 407 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 RPL13P26373 211 aaKnown RBP3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GYS2P54840 703 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GPR85P60893 370 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 RPL11P62913 178 aaKnown RBP3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ST5P78524 1137 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PABPC4Q13310 644 aaKnown RBP eCLIP3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SQSTM1Q13501 440 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TESK1Q15569 626 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SNAPC4Q5SXM2 1469 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 STYK1Q6J9G0 422 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 KRT26Q7Z3Y9 468 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TXNDC5Q8NBS9 432 aaKnown RBP3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TDRD9Q8NDG6 1382 aaKnown RBP3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MMP19Q99542 508 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CSRNP2Q9H175 543 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 RXFP1Q9HBX9 757 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 JADE2Q9NQC1 790 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PDLIM7Q9NR12 457 aa3.57□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TARBP1Q13395 1621 aaKnown RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ABCC10Q5T3U5 1492 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ALG1L2C9J202 215 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FAM47E-STBD1D6RA91 191 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 KCNQ2O43526 872 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GAS7O60861 476 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZNF623O75123 536 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 L1CAMP32004 1257 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MCM7P33993 719 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 INHBCP55103 352 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CACNB2Q08289 660 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FAPQ12884 760 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SKIDA1Q1XH10 827 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 BHLHA9Q7RTU4 235 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZC3H7AQ8IWR0 971 aaKnown RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FAM9AQ8IZU1 332 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 AMER2Q8N7J2 671 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PRPF38AQ8NAV1 312 aaKnown RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TMEM145Q8NBT3 493 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 USP33Q8TEY7 942 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 COPS5Q92905 334 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CHAMP1Q96JM3 812 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 LCORQ96JN0 433 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 EXOC2Q96KP1 924 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PTCHD1Q96NR3 888 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 METTL14Q9HCE5 456 aaKnown RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TYW1Q9NV66 732 aaKnown RBP3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NUDT5Q9UKK9 219 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZKSCAN5Q9Y2L8 839 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CD2APQ9Y5K6 639 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 COL4A3BPQ9Y5P4 624 aa3.56□□□□□ -1.84
RNU6-1140P-201ENST00000410517 H7BY64 318 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 KRIT1O00522 736 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FGF10O15520 208 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 BRINP1O60477 761 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DLX3O60479 287 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PDE8AO60658 829 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 VAMP4O75379 141 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 THBDP07204 575 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MYCLP1P12525 358 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NEK4P51957 841 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GUCY1A3Q02108 690 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SPIRE1Q08AE8 756 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PAK1Q13153 545 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TM4SF20Q53R12 229 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DALRD3Q5D0E6 543 aaKnown RBP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FAM209AQ5JX71 171 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MIIPQ5JXC2 388 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SLC35F1Q5T1Q4 408 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DDX46Q7L014 1031 aaKnown RBP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PLEKHH3Q7Z736 793 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 C11orf74Q86VG3 221 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms