RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MAGOHBQ96A72 148 aaKnown RBP12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 DESI2Q9BSY9 194 aa12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 ZMYM6O95789 1325 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 AOX1Q06278 1338 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 EFCAB14O75071 495 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 EEF1DP29692 281 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 BPIFB4P59827 614 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 FRMD3A2A2Y4 597 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 KRT87PA6NCN2 255 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 TSC1Q92574 1164 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 TNKSO95271 1327 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 ASMTLO95671 621 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 PLS3P13797 630 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 ZNF75DP51815 510 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 KPNA2P52292 529 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 TTI1O43156 1089 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 STAG1Q8WVM7 1258 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
PRPF40A-202ENST00000410080 NR2F2P24468 414 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 WHAMMP3Q1A5X7 153 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 MMP19Q99542 508 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 CAPN11Q9UMQ6 739 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 HYOU1Q9Y4L1 999 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 ATP5JP18859 108 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 ASPRV1Q53RT3 343 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 C10orf76Q5T2E6 689 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 HOXB7P09629 217 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 EHHADHQ08426 723 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 MSTO1Q9BUK6 570 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 KIAA0232Q92628 1395 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 ARHGAP10A1A4S6 786 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 RSPH10B2B2RC85 870 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 E2F6O75461 281 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 DDAH1O94760 285 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 RSPH10BP0C881 870 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 PSMA2P25787 234 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 PASD1Q8IV76 773 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 NRBF2Q96F24 287 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 CDHR1Q96JP9 859 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 SYCE1LA8MT33 242 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 K7ERI5 159 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 IFNAR2P48551 515 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 STXBP2Q15833 593 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 RAB42Q8N4Z0 105 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 EXOC4Q96A65 974 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 SP110Q9HB58 689 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 PZPP20742 1482 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 PI4K2BG5E9Z4 385 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 MOCS3O95396 460 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 SERPINB2P05120 415 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 LIG3P49916 1009 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 VMP1Q96GC9 406 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 BMP3P12645 472 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 SMAD1Q15797 465 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 RASGRP4Q8TDF6 673 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 EDEM3Q9BZQ6 932 aa12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 C6orf203Q9P0P8 240 aaPredicted RBP12.07□□□□□ -0.48
PRPF40A-202ENST00000410080 GOLGA8IPA6NC78 632 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 GOLGA8JA6NMD2 632 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 LRRC23Q53EV4 343 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 PPP6R3Q5H9R7 873 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 RGL1Q9NZL6 768 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 RNF181Q9P0P0 153 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 NDUFB5O43674 189 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 CPB1P15086 417 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 EIF2AK2P19525 551 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 RHPN2Q8IUC4 686 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 TRIM45Q9H8W5 580 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ADCY9O60503 1353 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 PRR23AA6NEV1 266 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ZKSCAN8Q15776 578 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 TTC23LQ6PF05 361 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ZNF507Q8TCN5 953 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 ZBTB18Q99592 522 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 DFFAO00273 331 aa12.06□□□□□ -0.48
PRPF40A-202ENST00000410080 HIP1RO75146 1068 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms