RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
DYSF-209ENST00000410041 LRRC23Q53EV4 343 aaPredicted RBP13.95□□□□□ -0.18
DYSF-209ENST00000410041 USP17L2Q6R6M4 530 aa13.95□□□□□ -0.18
DYSF-209ENST00000410041 NSMFQ6X4W1 530 aa13.95□□□□□ -0.18
DYSF-209ENST00000410041 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
DYSF-209ENST00000410041 BATF3Q9NR55 127 aa13.95□□□□□ -0.18
DYSF-209ENST00000410041 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 CHRNA3P32297 505 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 RFC1P35251 1148 aaPredicted RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 ANTXR2P58335 489 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 GTF2IP78347 998 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 ARHGAP4P98171 946 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 HDLBPQ00341 1268 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 KCNH2Q12809 1159 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 RSRC2Q7L4I2 434 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 NRKQ7Z2Y5 1582 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 HAUS1Q96CS2 278 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 CCDC17Q96LX7 622 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 TRIM10Q9UDY6 481 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 CCNL1Q9UK58 526 aaPredicted RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 LIG4P49917 911 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 MXI1P50539 228 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 FAM47EQ6ZV65 393 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 TAB3Q8N5C8 712 aaPredicted RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 RAD54LQ92698 747 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 CALR3Q96L12 384 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 TMEM206Q9H813 350 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 SGK1O00141 431 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 HNRNPH1P31943 449 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 ICA1Q05084 483 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 H0Y3Z8 333 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 PRPF6O94906 941 aaKnown RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 SPDL1Q96EA4 605 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 DYNLL2Q96FJ2 89 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 ETNK1Q9HBU6 452 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 DNAJC12Q9UKB3 198 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 PACSIN2Q9UNF0 486 aaPredicted RBP13.94□□□□□ -0.18
DYSF-209ENST00000410041 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 DAPK3O43293 454 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
DYSF-209ENST00000410041 H3BQF6 201 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 TTLL1O95922 423 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 CHGBP05060 677 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ANKRD40Q6AI12 368 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 TMED8Q6PL24 325 aaPredicted RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ACCSQ96QU6 501 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 PARVGQ9HBI0 331 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 MRPL47Q9HD33 250 aaKnown RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 HAUS2Q9NVX0 235 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 SPHKAPQ2M3C7 1700 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 FAM107AO95990 144 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 DBN1Q16643 649 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 NACC1Q96RE7 527 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 USP17L3A6NCW0 530 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 USP17L4A6NCW7 530 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 MEIS1O00470 390 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 RNF8O76064 485 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 USP17L1Q7RTZ2 530 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 CAV1Q03135 178 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 TTLL12Q14166 644 aaPredicted RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 BSPRYQ5W0U4 402 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 CCSER1Q9C0I3 900 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 POTEMA6NI47 508 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 KRT19P08727 400 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 FOXO4P98177 505 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 SCARF1Q14162 830 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 IGDCC4Q8TDY8 1250 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 DDX23Q9BUQ8 820 aaKnown RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 FGFR1OP2Q9NVK5 253 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 SUFUQ9UMX1 484 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 RASA4BC9J798 803 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 RASA4O43374 803 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 BRAFP15056 766 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ATP2B4P23634 1241 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 COASYQ13057 564 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 SYT2Q8N9I0 419 aaPredicted RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 CCT6BQ92526 530 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ZIM3Q96PE6 472 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 WDR11Q9BZH6 1224 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 ECT2Q9H8V3 914 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
DYSF-209ENST00000410041 DNAJC17Q9NVM6 304 aaKnown RBP13.93□□□□□ -0.18
DYSF-209ENST00000410041 KRT81Q14533 505 aa13.92□□□□□ -0.18
DYSF-209ENST00000410041 CDKL2Q92772 493 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms