RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NR2F2P24468 414 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 SLC16A2P36021 539 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 GIT2Q14161 759 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 CLEC10AQ8IUN9 316 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 ETNPPLQ8TBG4 499 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 ACTRT1Q8TDG2 376 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 GJA10Q969M2 543 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 CALR3Q96L12 384 aaKnown RBP18.31■□□□□ 0.52
LIMS2-208ENST00000410011 METTL14Q9HCE5 456 aaKnown RBP18.31■□□□□ 0.52
LIMS2-208ENST00000410011 USP40Q9NVE5 1235 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 ARMCX3Q9UH62 379 aaPredicted RBP18.31■□□□□ 0.52
LIMS2-208ENST00000410011 HDAC9Q9UKV0 1011 aa18.31■□□□□ 0.52
LIMS2-208ENST00000410011 FTCDO95954 541 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 UCHL3P15374 230 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 KCTD1Q719H9 257 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 ARL8AQ96BM9 186 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.3■□□□□ 0.52
LIMS2-208ENST00000410011 NYAP2Q9P242 653 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 INTUQ9ULD6 942 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 NFU1Q9UMS0 254 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 NENFQ9UMX5 172 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 PCDHA1Q9Y5I3 950 aa18.3■□□□□ 0.52
LIMS2-208ENST00000410011 A0A087WUV0 522 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 BHMG1C9JSJ3 638 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 EBAG9O00559 213 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 CALUO43852 315 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 AFPP02771 609 aaKnown RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 GUCY2DQ02846 1103 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 RPS6KA1Q15418 735 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 CATSPER3Q86XQ3 398 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 FAM20AQ96MK3 541 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 EFCC1Q9HA90 598 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 DNM3Q9UQ16 869 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 A0A0A6YYK5 440 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 NPHP3-ACAD11A0A0J9YXS1 232 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 GTPBP10A4D1E9 387 aaKnown RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L15C9J2P7 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L13C9JLJ4 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L11C9JVI0 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L18D6R9N7 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L22D6RA61 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L17D6RBQ6 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L19D6RCP7 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L20D6RJB6 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 MEIS2O14770 477 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 SLC16A3O15427 465 aaKnown RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 KRT18P05783 430 aaKnown RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 GNGT1P63211 74 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 MRPS25P82663 173 aaKnown RBP18.29■□□□□ 0.52
LIMS2-208ENST00000410011 PTK2Q05397 1052 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L24Q0WX57 530 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 USP17L6PQ6QN14 398 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 KDM7AQ6ZMT4 941 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 LRRC57Q8N9N7 239 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 TAF4BQ92750 862 aa18.29■□□□□ 0.52
LIMS2-208ENST00000410011 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 SRRM3A6NNA2 597 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-208ENST00000410011 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-208ENST00000410011 PON1P27169 355 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 HSPA9P38646 679 aaKnown RBP18.28■□□□□ 0.52
LIMS2-208ENST00000410011 ZNF571Q7Z3V5 609 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-208ENST00000410011 CERS5Q8N5B7 392 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 BCAS4Q8TDM0 211 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 PIK3R5Q8WYR1 880 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 KRT12Q99456 494 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 ISCUQ9H1K1 167 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 NAGPAQ9UK23 515 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 KIF13BQ9NQT8 1826 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 ATXN2Q99700 1313 aaKnown RBP18.28■□□□□ 0.52
LIMS2-208ENST00000410011 GFPT2O94808 682 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 KIF4AO95239 1232 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 SPATA31C1P0DKV0 1188 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 RPL13P26373 211 aaKnown RBP18.28■□□□□ 0.52
LIMS2-208ENST00000410011 MMP14P50281 582 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 NPEPPSP55786 919 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 CUL1Q13616 776 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 EXOC3L4Q17RC7 722 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 CDC42EP5Q6NZY7 148 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 TEX2Q8IWB9 1127 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 CASKIN2Q8WXE0 1202 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 MYH4Q9Y623 1939 aa18.28■□□□□ 0.52
LIMS2-208ENST00000410011 ZNF233A6NK53 670 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 FLOT1O75955 427 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 FAM153BP0C7A2 387 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 ZBTB48P10074 688 aaPredicted RBP18.27■□□□□ 0.52
LIMS2-208ENST00000410011 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
LIMS2-208ENST00000410011 CIITAP33076 1130 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 HOXD13P35453 343 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 ARHGAP4P98171 946 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 FAM153CQ494X1 144 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 SPATS2Q86XZ4 545 aaKnown RBP18.27■□□□□ 0.52
LIMS2-208ENST00000410011 GPIHBP1Q8IV16 184 aa18.27■□□□□ 0.52
LIMS2-208ENST00000410011 LMBR1Q8WVP7 490 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms