RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 C10orf71Q711Q0 1435 aa7.75□□□□□ -1.17
LSM5-203ENST00000409782 SOS1Q07889 1333 aaPredicted RBP7.75□□□□□ -1.17
LSM5-203ENST00000409782 HEG1Q9ULI3 1381 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 FAM170BA6NMN3 283 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 BPIP17213 487 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 NAT1P18440 290 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 GNALP38405 381 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 SLC39A6Q13433 755 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 STAT4Q14765 748 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 ADAT2Q7Z6V5 191 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 DNAJC10Q8IXB1 793 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 SMC5Q8IY18 1101 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 EXOC8Q8IYI6 725 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 RTF1Q92541 710 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 PPP1R14AQ96A00 147 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 DPH2Q9BQC3 489 aaPredicted RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 NKX2-4Q9H2Z4 354 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 PNNQ9H307 717 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 FAM86C1Q9NVL1 165 aa7.74□□□□□ -1.17
LSM5-203ENST00000409782 APOBEC2Q9Y235 224 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 DIS3Q9Y2L1 958 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 TNPO3Q9Y5L0 923 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 USP42Q9H9J4 1324 aaKnown RBP7.74□□□□□ -1.17
LSM5-203ENST00000409782 KIF13BQ9NQT8 1826 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 SCN7AQ01118 1682 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 COL15A1P39059 1388 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 TBX1O43435 398 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 OPA1O60313 960 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 EIF5BO60841 1220 aaKnown RBP7.73□□□□□ -1.17
LSM5-203ENST00000409782 PEX14O75381 377 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 CPP00450 1065 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 MMP10P09238 476 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 FAM87AP0C7U9 286 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 CYP19A1P11511 503 aaPredicted RBP7.73□□□□□ -1.17
LSM5-203ENST00000409782 GYS1P13807 737 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 RFC4P35249 363 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 ZNF790Q6PG37 636 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 SMIM5Q71RC9 77 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 ZNF765Q7L2R6 523 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 ARMCX6Q7L4S7 300 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 SHISA5Q8N114 240 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 RNF141Q8WVD5 230 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 SCLYQ96I15 445 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 ZNF496Q96IT1 587 aaPredicted RBP7.73□□□□□ -1.17
LSM5-203ENST00000409782 KREMEN1Q96MU8 473 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 PLEKHF1Q96S99 279 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 MAPK8IP3Q9UPT6 1336 aa7.73□□□□□ -1.17
LSM5-203ENST00000409782 TCRBV16S1A1N1A0A5B0 115 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 CYP26A1O43174 497 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 CAND2O75155 1236 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 KATNA1O75449 491 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 STARD3NLO95772 234 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 SCGB1D2O95969 90 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 SSTR4P31391 388 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 ETV3P41162 512 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 STRN3Q13033 797 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 MTMR1Q13613 665 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 LRP8Q14114 963 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 PCBP1Q15365 356 aaKnown RBP eCLIP7.72□□□□□ -1.17
LSM5-203ENST00000409782 SEPT7Q16181 437 aaKnown RBP7.72□□□□□ -1.17
LSM5-203ENST00000409782 SLC35F1Q5T1Q4 408 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 NXNQ6DKJ4 435 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 GTF2IRD2BQ6EKJ0 949 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 UBE2R2Q712K3 238 aaPredicted RBP7.72□□□□□ -1.17
LSM5-203ENST00000409782 FGD2Q7Z6J4 655 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 UBE3DQ7Z6J8 389 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 GTF2IRD2Q86UP8 949 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 NLGN2Q8NFZ4 835 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 BTN2A2Q8WVV5 523 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 PMM1Q92871 262 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 TSR2Q969E8 191 aaKnown RBP7.72□□□□□ -1.17
LSM5-203ENST00000409782 CHMP4CQ96CF2 233 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 C1orf159Q96HA4 380 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 MAGEB10Q96LZ2 347 aaPredicted RBP7.72□□□□□ -1.17
LSM5-203ENST00000409782 FMNL2Q96PY5 1086 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 TTC1Q99614 292 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 TEX13AQ9BXU3 409 aaPredicted RBP7.72□□□□□ -1.17
LSM5-203ENST00000409782 CDH19Q9H159 772 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 IFT22Q9H7X7 185 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 ZBTB1Q9Y2K1 713 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 PCDHB12Q9Y5F1 795 aa7.72□□□□□ -1.17
LSM5-203ENST00000409782 LAMB4A4D0S4 1761 aa7.71□□□□□ -1.17
LSM5-203ENST00000409782 KDM3BQ7LBC6 1761 aa7.71□□□□□ -1.17
LSM5-203ENST00000409782 PXDNLA1KZ92 1463 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 SHTN1A0MZ66 631 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 BTBD11A6QL63 1104 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 K7ESF4 209 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 AQP7O14520 342 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 AKAP10O43572 662 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 FOSL1P15407 271 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 NEK4P51957 841 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 RHBDL3P58872 404 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 PIN1Q13526 163 aaPredicted RBP7.71□□□□□ -1.18
LSM5-203ENST00000409782 UBE4AQ14139 1066 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 TESK1Q15569 626 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 NTRK3Q16288 839 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 STYK1Q6J9G0 422 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 MCM10Q7L590 875 aa7.71□□□□□ -1.18
LSM5-203ENST00000409782 OR2W6PQ8NHA6 318 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms