RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 MED15Q96RN5 788 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 SH2D3AQ9BRG2 576 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 RUSC1Q9BVN2 902 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 TRIM5Q9C035 493 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 PANK4Q9NVE7 773 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 TBC1D7Q9P0N9 293 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 SYNRGQ9UMZ2 1314 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 TMEM150BA6NC51 233 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 IKBKBO14920 756 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 UBA1P22314 1058 aaKnown RBP13.87□□□□□ -0.19
CHMP3-204ENST00000409727 SFNP31947 248 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 ICAM3P32942 547 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 QARSP47897 775 aaKnown RBP13.87□□□□□ -0.19
CHMP3-204ENST00000409727 TPM4P67936 248 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 SREBF2Q12772 1141 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 LY6KQ17RY6 165 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 PLEKHH3Q7Z736 793 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 GIMAP8Q8ND71 665 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-204ENST00000409727 NEK9Q8TD19 979 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 ZSWIM4Q9H7M6 989 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 FANCLQ9NW38 375 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 NFE2L3Q9Y4A8 694 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 PCDHA10Q9Y5I2 948 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
CHMP3-204ENST00000409727 NFASCO94856 1347 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 PVALEFA0A1B0GWK0 134 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 STRNO43815 780 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 ERCC5P28715 1186 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-204ENST00000409727 MAPK4P31152 587 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 ACTR2P61160 394 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 COASYQ13057 564 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
CHMP3-204ENST00000409727 ARMCX2Q7L311 632 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 REEP2Q9BRK0 252 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 GABBR1Q9UBS5 961 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 LRRC37A2A6NM11 1700 aa13.86□□□□□ -0.19
CHMP3-204ENST00000409727 ADGRA2Q96PE1 1338 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 RSPH10B2B2RC85 870 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 ARIH2O95376 493 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 RSPH10BP0C881 870 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 ATP1A3P13637 1013 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 INHBEP58166 350 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 PSMC5P62195 406 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 PAK1Q13153 545 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 CRHR2Q13324 411 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 GIT2Q14161 759 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 LRRC41Q15345 812 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 RINT1Q6NUQ1 792 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 SWSAP1Q6NVH7 229 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 CCDC65Q8IXS2 484 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 SMAP1Q8IYB5 467 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-204ENST00000409727 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 HSD3B7Q9H2F3 369 aa13.85□□□□□ -0.19
CHMP3-204ENST00000409727 ARHGEF35A5YM69 484 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 TRIM49BA6NDI0 452 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 ASB14A6NK59 587 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 BACH1O14867 736 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 TLR2O60603 784 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 GGPS1O95749 300 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 PSAPP07602 524 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 MUTP22033 750 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 STIM1Q13586 685 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 GRB14Q14449 540 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 TPD52L1Q16890 204 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 PLA2G4FQ68DD2 849 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 MAEAQ7L5Y9 396 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 ENOX1Q8TC92 643 aaKnown RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 ZFYVE28Q9HCC9 887 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 ZCCHC17Q9NP64 241 aaKnown RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 MCM3APO60318 1980 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 SFI1A8K8P3 1242 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 AOC2O75106 756 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 PTGS1P23219 599 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 YY1P25490 414 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 TMEM63BQ5T3F8 832 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 MIS18BP1Q6P0N0 1132 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 CCDC60Q8IWA6 550 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 ABRAQ8N0Z2 381 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 KCTD17Q8N5Z5 321 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 FGFBP2Q9BYJ0 223 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 SAMSN1Q9NSI8 373 aaKnown RBP13.84□□□□□ -0.19
CHMP3-204ENST00000409727 RWDD2AQ9UIY3 292 aa13.84□□□□□ -0.19
CHMP3-204ENST00000409727 PSMA7O14818 248 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.2
CHMP3-204ENST00000409727 FARP2O94887 1054 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-204ENST00000409727 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
CHMP3-204ENST00000409727 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.2
CHMP3-204ENST00000409727 NEDD9Q14511 834 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms