RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 NACC1Q96RE7 527 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 SENP7Q9BQF6 1050 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 REEP2Q9BRK0 252 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 GTPBP4Q9BZE4 634 aaKnown RBP15.65■□□□□ 0.1
GPNMB-203ENST00000409458 IFNKQ9P0W0 207 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 TCEAL9Q9UHQ7 104 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 TELO2Q9Y4R8 837 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 PLXNA1Q9UIW2 1896 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 PSMA7O14818 248 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 SORBS3O60504 671 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
GPNMB-203ENST00000409458 SP2Q02086 613 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 CDKAL1Q5VV42 579 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 RINT1Q6NUQ1 792 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 RGMBQ6NW40 437 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 SEPT14Q6ZU15 432 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 GLIS3Q8NEA6 775 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 FGFBP2Q9BYJ0 223 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 XPO4Q9C0E2 1151 aaKnown RBP15.64■□□□□ 0.09
GPNMB-203ENST00000409458 ZSWIM4Q9H7M6 989 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 GPBP1L1Q9HC44 474 aaPredicted RBP15.64■□□□□ 0.09
GPNMB-203ENST00000409458 JPH1Q9HDC5 661 aaPredicted RBP15.64■□□□□ 0.09
GPNMB-203ENST00000409458 MCM3APO60318 1980 aa15.64■□□□□ 0.09
GPNMB-203ENST00000409458 KIF3CO14782 793 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 QARSP47897 775 aaKnown RBP15.63■□□□□ 0.09
GPNMB-203ENST00000409458 PSMD2Q13200 908 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 FAM26FQ5R3K3 315 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 RDM1Q8NG50 284 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 DHTKD1Q96HY7 919 aaPredicted RBP15.63■□□□□ 0.09
GPNMB-203ENST00000409458 TBC1D7Q9P0N9 293 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 PCDHA2Q9Y5H9 948 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 RSPH10B2B2RC85 870 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 IGF2BP3O00425 579 aaKnown RBP eCLIP15.63■□□□□ 0.09
GPNMB-203ENST00000409458 LYPLA2O95372 231 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 SERPINC1P01008 464 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 SLC10A3P09131 477 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 RSPH10BP0C881 870 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 PPP1R2P41236 205 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 SP4Q02446 784 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 TTI2Q6NXR4 508 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 C1orf186Q6ZWK4 172 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 P2RX5Q93086 422 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 ZHX3Q9H4I2 956 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 SLC9A2Q9UBY0 812 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 TLL2Q9Y6L7 1015 aa15.63■□□□□ 0.09
GPNMB-203ENST00000409458 ADGRA2Q96PE1 1338 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 MANSC4A6NHS7 340 aaPredicted RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 UBA1P22314 1058 aaKnown RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 CCNE1P24864 410 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 PSMC5P62195 406 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 LRRC41Q15345 812 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 TPD52L1Q16890 204 aaPredicted RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 FAM110CQ1W6H9 321 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 HERC4Q5GLZ8 1057 aaPredicted RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 EEPD1Q7L9B9 569 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 DRC7Q8IY82 874 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 SMAP1Q8IYB5 467 aaPredicted RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 NAP1L5Q96NT1 182 aaPredicted RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 MPHOSPH6Q99547 160 aaKnown RBP15.62■□□□□ 0.09
GPNMB-203ENST00000409458 PCDHA10Q9Y5I2 948 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 ARID2Q68CP9 1835 aa15.62■□□□□ 0.09
GPNMB-203ENST00000409458 ARHGEF35A5YM69 484 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 B4DLN1 442 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 TBCAO75347 108 aaKnown RBP15.61■□□□□ 0.09
GPNMB-203ENST00000409458 CDK11BP21127 795 aaKnown RBP15.61■□□□□ 0.09
GPNMB-203ENST00000409458 ADORA2AP29274 412 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 UBASH3AP57075 661 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 ACTR2P61160 394 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 CYFIP1Q7L576 1253 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 SFR1Q86XK3 245 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 C4orf19Q8IY42 314 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 GUF1Q8N442 669 aaKnown RBP15.61■□□□□ 0.09
GPNMB-203ENST00000409458 MORC4Q8TE76 937 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 DUSP9Q99956 384 aaKnown RBP15.61■□□□□ 0.09
GPNMB-203ENST00000409458 SEMA6BQ9H3T3 888 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 INTS13Q9NVM9 706 aa15.61■□□□□ 0.09
GPNMB-203ENST00000409458 BICDL2A1A5D9 508 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 TMEM150BA6NC51 233 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 FAM155AB1AL88 458 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-203ENST00000409458 CBFA2T2O43439 604 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 YWHABP31946 246 aaKnown RBP15.6■□□□□ 0.09
GPNMB-203ENST00000409458 ZNF792Q3KQV3 632 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 HS1BP3Q53T59 392 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 ANKRD40Q6AI12 368 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 APTXQ7Z2E3 356 aaKnown RBP15.6■□□□□ 0.09
GPNMB-203ENST00000409458 GPR142Q7Z601 462 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 FBXO16Q8IX29 292 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-203ENST00000409458 POLD4Q9HCU8 107 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 GABBR1Q9UBS5 961 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 DBR1Q9UK59 544 aaKnown RBP15.6■□□□□ 0.09
GPNMB-203ENST00000409458 ZNF236Q9UL36 1845 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 ARIH2O95376 493 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 PSAPP07602 524 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 RARRES1P49788 294 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 CASP5P51878 434 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 CCDC144BQ3MJ40 725 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 PLA2G4FQ68DD2 849 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 ABHD15Q6UXT9 468 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms