RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KLRF2D3W0D1 207 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 ZBTB5O15062 677 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 CTSHP09668 335 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 SMIM10L2AP0DMW4 78 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 SMIM10L2BP0DMW5 78 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 HOXD8P13378 290 aaPredicted RBP8.95□□□□□ -0.98
LSM5-202ENST00000409292 HSD17B4P51659 736 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 GPNMBQ14956 572 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 SART3Q15020 963 aaKnown RBP8.95□□□□□ -0.98
LSM5-202ENST00000409292 PGM5Q15124 567 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 TRIM71Q2Q1W2 868 aaKnown RBP8.95□□□□□ -0.98
LSM5-202ENST00000409292 HSDL1Q3SXM5 330 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 TCEAL5Q5H9L2 206 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 TAF2Q6P1X5 1199 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 STOX1Q6ZVD7 989 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 SPRED2Q7Z698 418 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 NLRX1Q86UT6 975 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 FCHSD1Q86WN1 690 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 TBC1D10CQ8IV04 446 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 ADHFE1Q8IWW8 467 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 TBC1D5Q92609 795 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 CTAGE1Q96RT6 745 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 CPVLQ9H3G5 476 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 JMJD4Q9H9V9 463 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 COL20A1Q9P218 1284 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 PCDHB15Q9Y5E8 787 aa8.95□□□□□ -0.98
LSM5-202ENST00000409292 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 SIP14410 1827 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 FSD2A1L4K1 749 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 M0QZ92 97 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 FIBPO43427 364 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 SORBS3O60504 671 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 NR1I2O75469 434 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 LGALS2P05162 132 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 SDSP20132 328 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 UBA1P22314 1058 aaKnown RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 MRE11P49959 708 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 ARHGAP4P98171 946 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 ZNF200P98182 395 aaPredicted RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 GHRHRQ02643 423 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 AAMPQ13685 434 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 BTG3Q14201 252 aaPredicted RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 XRRA1Q6P2D8 792 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 METTL7BQ6UX53 244 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 ZNF589Q86UQ0 364 aaPredicted RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 HOMER1Q86YM7 354 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 SUGP1Q8IWZ8 645 aaKnown RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 ENAHQ8N8S7 591 aaPredicted RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 CDHR1Q96JP9 859 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 IRF2BPLQ9H1B7 796 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 CD320Q9NPF0 282 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 C11orf16Q9NQ32 467 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 ZSWIM5Q9P217 1185 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 DAXXQ9UER7 740 aaPredicted RBP8.94□□□□□ -0.98
LSM5-202ENST00000409292 NEDD4P46934 1319 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 NRCAMQ92823 1304 aa8.94□□□□□ -0.98
LSM5-202ENST00000409292 KIAA1217Q5T5P2 1943 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 TREHO43280 583 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 STAG3L1P0CL83 205 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 SRGAP2BP0DMP2 458 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 FECHP22830 423 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 HOXA13P31271 388 aaPredicted RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 BMPR1AP36894 532 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 NDUFV1P49821 464 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 ZP2Q05996 745 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 SMAD4Q13485 552 aaKnown RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 HDAC1Q13547 482 aaPredicted RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 MBTPS1Q14703 1052 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 NAALADL2Q58DX5 795 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 UTP14CQ5TAP6 766 aaKnown RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 CWC27Q6UX04 472 aaKnown RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 FAM43BQ6ZT52 329 aaPredicted RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 RPAINQ86UA6 219 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 SMARCC2Q8TAQ2 1214 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 C16orf70Q9BSU1 422 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 DSCC1Q9BVC3 393 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 PLVAPQ9BX97 442 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 RWDD1Q9H446 243 aaPredicted RBP8.93□□□□□ -0.98
LSM5-202ENST00000409292 RNPEPQ9H4A4 650 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 SALL3Q9BXA9 1300 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 MYH6P13533 1939 aa8.93□□□□□ -0.98
LSM5-202ENST00000409292 MICAL3Q7RTP6 2002 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 ADGRA3Q8IWK6 1321 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 PNMA6FA0A0J9YX94 578 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 STXBP3O00186 592 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 ICAM3P32942 547 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 NHLH1Q02575 133 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 ODR4Q5SWX8 454 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 CYFIP1Q7L576 1253 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 CATIPQ7Z7H3 387 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 WNT8BQ93098 351 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 FTHL17Q9BXU8 183 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 LNPKQ9C0E8 428 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 IGFLR1Q9H665 355 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 EHMT1Q9H9B1 1298 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 SETD4Q9NVD3 440 aa8.92□□□□□ -0.98
LSM5-202ENST00000409292 SEC63Q9UGP8 760 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms