RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 SF3A3Q12874 501 aaKnown RBP eCLIP18.85■□□□□ 0.612e-9■■□□□ 14
PACSIN2-205ENST00000407585 CUL1Q13616 776 aa18.85■□□□□ 0.61
PACSIN2-205ENST00000407585 IFI16Q16666 785 aaKnown RBP18.85■□□□□ 0.61
PACSIN2-205ENST00000407585 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
PACSIN2-205ENST00000407585 ZNF804AQ7Z570 1209 aa18.85■□□□□ 0.61
PACSIN2-205ENST00000407585 GANQ9H2C0 597 aa18.85■□□□□ 0.61
PACSIN2-205ENST00000407585 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
PACSIN2-205ENST00000407585 GMNCA6NCL1 334 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 RDXP35241 583 aaKnown RBP18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 ZNF844Q08AG5 666 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 UAP1Q16222 522 aaPredicted RBP18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 CCDC13Q8IYE1 715 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 METTL13Q8N6R0 699 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 PBKQ96KB5 322 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 COL22A1Q8NFW1 1626 aaPredicted RBP18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 MAP2K2P36507 400 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 STAT3P40763 770 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 IFFO1Q0D2I5 559 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 PRPF4BQ13523 1007 aaKnown RBP18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 KRT71Q3SY84 523 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 PPP4R3AQ6IN85 833 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 RUFY4Q6ZNE9 571 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 DAAM2Q86T65 1068 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 GEMIN8Q9NWZ8 242 aaKnown RBP18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 ARMCX3Q9UH62 379 aaPredicted RBP18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 SNED1Q8TER0 1413 aa18.84■□□□□ 0.61
PACSIN2-205ENST00000407585 CELF4Q9BZC1 486 aaKnown RBP18.83■□□□□ 0.61
PACSIN2-205ENST00000407585 NT5C3AQ9H0P0 336 aa18.83■□□□□ 0.61
PACSIN2-205ENST00000407585 UCHL3P15374 230 aa18.83■□□□□ 0.6
PACSIN2-205ENST00000407585 SEPT2Q15019 361 aa18.83■□□□□ 0.6
PACSIN2-205ENST00000407585 EXOC3L4Q17RC7 722 aa18.83■□□□□ 0.6
PACSIN2-205ENST00000407585 TTBK2Q6IQ55 1244 aa18.83■□□□□ 0.6
PACSIN2-205ENST00000407585 ADAT2Q7Z6V5 191 aaKnown RBP18.83■□□□□ 0.6
PACSIN2-205ENST00000407585 NAGPAQ9UK23 515 aa18.83■□□□□ 0.6
PACSIN2-205ENST00000407585 TTI1O43156 1089 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 LRIG3Q6UXM1 1119 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 CUL5Q93034 780 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.82■□□□□ 0.67e-7■■■□□ 17.7
PACSIN2-205ENST00000407585 TMEM59LQ9UK28 342 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 ATXN2Q99700 1313 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 MEIS1O00470 390 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 SMARCA1P28370 1054 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 ECHS1P30084 290 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 ACTN3Q08043 901 aaPredicted RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 DPP8Q6V1X1 898 aaPredicted RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 IRF2BP2Q7Z5L9 587 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 U2AF1L4Q8WU68 220 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 SCFD2Q8WU76 684 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 KDM3AQ9Y4C1 1321 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 POTEFA5A3E0 1075 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 FLOT1O75955 427 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 POTEIP0CG38 1075 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 CASP5P51878 434 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 MRPL12P52815 198 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 MAGOHP61326 146 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 DHX9Q08211 1270 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 POTEGQ6S5H5 508 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 POTEEQ6S8J3 1075 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 MAGOHBQ96A72 148 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 KCTD10Q9H3F6 313 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 PSTPIP2Q9H939 334 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 KLC4Q9NSK0 619 aa18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 DDX20Q9UHI6 824 aaKnown RBP18.82■□□□□ 0.6
PACSIN2-205ENST00000407585 hCG_1984214I3L0E3 225 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 MYBP10242 640 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 CYP11B2P19099 503 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 QPCTQ16769 361 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 YTHDF3Q7Z739 585 aaKnown RBP18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 CPLX4Q7Z7G2 160 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 VPS36Q86VN1 386 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 ZNF713Q8N859 430 aaPredicted RBP18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L15C9J2P7 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L13C9JLJ4 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L11C9JVI0 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L18D6R9N7 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L22D6RA61 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L17D6RBQ6 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L19D6RCP7 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L20D6RJB6 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 GNPATO15228 680 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 AFPP02771 609 aaKnown RBP18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 H2AFZP0C0S5 128 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 XRCC5P13010 732 aaKnown RBP18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L24Q0WX57 530 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 ASPRV1Q53RT3 343 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 GJB7Q6PEY0 223 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 USP17L6PQ6QN14 398 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 H2AFVQ71UI9 128 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 TPCN2Q8NHX9 752 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 ACTRT1Q8TDG2 376 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 CDCA7Q9BWT1 371 aaPredicted RBP18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 MTMR4Q9NYA4 1195 aa18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
PACSIN2-205ENST00000407585 DCDC2CA8MYV0 355 aa18.8■□□□□ 0.6
PACSIN2-205ENST00000407585 PPP2R2AP63151 447 aa18.8■□□□□ 0.6
PACSIN2-205ENST00000407585 PABPC4Q13310 644 aaKnown RBP eCLIP18.8■□□□□ 0.63e-8■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms