RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 SNX17Q15036 470 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 LRRC26Q2I0M4 334 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 FAM160B1Q5W0V3 765 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 SLC43A3Q8NBI5 491 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 AFAP1L1Q8TED9 768 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 CHAMP1Q96JM3 812 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 ZNF396Q96N95 335 aaPredicted RBP18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 IPO9Q96P70 1041 aaKnown RBP18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 KATNAL1Q9BW62 490 aa18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 MAFBQ9Y5Q3 323 aaPredicted RBP18.9■□□□□ 0.62
HMGA1P7-201ENST00000406908 BMP15O95972 392 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 NASPP49321 788 aaPredicted RBP18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 RGS19P49795 217 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 FXR2P51116 673 aaKnown RBP eCLIP18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 UGCGQ16739 394 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 C1orf53Q5VUE5 145 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 ARL6IP4Q66PJ3 421 aaKnown RBP18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 PDXDC2PQ6P474 469 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 DTHD1Q6ZMT9 781 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 ERAP1Q9NZ08 941 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 ZNF215Q9UL58 517 aaPredicted RBP18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 CEP131Q9UPN4 1083 aa18.89■□□□□ 0.61
HMGA1P7-201ENST00000406908 ZNF862O60290 1169 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 DNM1Q05193 864 aaKnown RBP18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 PDIA5Q14554 519 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 SLC39A14Q15043 492 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 PLCB4Q15147 1175 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 TRIM60Q495X7 471 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 FAM47CQ5HY64 1035 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 NFRKBQ6P4R8 1299 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 EIF2AK1Q9BQI3 630 aaKnown RBP18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 RGL1Q9NZL6 768 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 HDAC6Q9UBN7 1215 aa18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
HMGA1P7-201ENST00000406908 VWA3AA6NCI4 1184 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 SLITRK3O94933 977 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 P4HBP07237 508 aaKnown RBP18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 SMIM10L2AP0DMW4 78 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 SMIM10L2BP0DMW5 78 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 MARCKSP29966 332 aaPredicted RBP18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 SLC26A2P50443 739 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 RTP1P59025 263 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 GRIN1Q05586 938 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 HIC1Q14526 733 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 TMEM266Q2M3C6 531 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 IGSF22Q8N9C0 903 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 LINC00301Q8NCQ3 95 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 BANK1Q8NDB2 785 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 DYDC2Q96IM9 177 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 HSD17B14Q9BPX1 270 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 LRWD1Q9UFC0 647 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
HMGA1P7-201ENST00000406908 STBD1O95210 358 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 QARSP47897 775 aaKnown RBP18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 PSMC5P62195 406 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 CYP4A11Q02928 519 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 TLE2Q04725 743 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 PTPN11Q06124 597 aaPredicted RBP18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 CTTNQ14247 550 aaKnown RBP18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 STK38Q15208 465 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 ATL3Q6DD88 541 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 TRMT1LQ7Z2T5 733 aaKnown RBP18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 SESTD1Q86VW0 696 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 C7orf31Q8N865 590 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 SEZ6LQ9BYH1 1024 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 WRAP73Q9P2S5 460 aaPredicted RBP18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 ATP11BQ9Y2G3 1177 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 MYH9P35579 1960 aaKnown RBP18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 WDR81Q562E7 1941 aa18.86■□□□□ 0.61
HMGA1P7-201ENST00000406908 MYH15Q9Y2K3 1946 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 POTEB3A0JP26 581 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 PP2D1A8MPX8 630 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 YEATS4O95619 227 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 SPATA31C1P0DKV0 1188 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 CDC25AP30304 524 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 ZNF200P98182 395 aaPredicted RBP18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 GDF6Q6KF10 455 aaPredicted RBP18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 POTEBQ6S5H4 581 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 ANKRD33Q7Z3H0 272 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 TPH2Q8IWU9 490 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 FAM126BQ8IXS8 530 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 CKAP2LQ8IYA6 745 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 ATP8B4Q8TF62 1192 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 ATP6V0A1Q93050 837 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 HTATIP2Q9BUP3 242 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 TRPV6Q9H1D0 765 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 SETD4Q9NVD3 440 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 GTF2IRD1Q9UHL9 959 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 FBXO2Q9UK22 296 aaPredicted RBP18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 TRPC6Q9Y210 931 aa18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 SRPRBQ9Y5M8 271 aaKnown RBP18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 MORC2Q9Y6X9 1032 aaPredicted RBP18.85■□□□□ 0.61
HMGA1P7-201ENST00000406908 HBP1O60381 514 aa18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 PQBP1O60828 265 aaKnown RBP18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 MED24O75448 989 aa18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 INSRRP14616 1297 aa18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 HOXC8P31273 242 aa18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 PRKCEQ02156 737 aa18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 CATSPER3Q86XQ3 398 aa18.84■□□□□ 0.61
HMGA1P7-201ENST00000406908 NEK9Q8TD19 979 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms