RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GOLGA8AA7E2F4 631 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 GOLGA8BA8MQT2 603 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 SCDO00767 359 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 NKRFO15226 690 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 NRDCO43847 1150 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 KDM1AO60341 852 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 CYP2C19P33261 490 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 ARL4AP40617 200 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 ZP2Q05996 745 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 EPHA7Q15375 998 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 MINDY4Q4G0A6 757 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 GORABQ5T7V8 394 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 TTLL7Q6ZT98 887 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 CPA6Q8N4T0 437 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 NUP43Q8NFH3 380 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 SEC14L1Q92503 715 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 DLG3Q92796 817 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 VTA1Q9NP79 307 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 PRDM11Q9NQV5 511 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
HMGB3P18-201ENST00000406327 TCRBV5S4A2TA0A5A2 114 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 KLHL33A6NCF5 533 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 TPD52L2O43399 206 aaKnown RBP6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 SDHAP31040 664 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 CEBPAP49715 358 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 EPHA5P54756 1037 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 OS9Q13438 667 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 GTF2H3Q13889 308 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 NR0B2Q15466 257 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 MSMPQ1L6U9 139 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 EFCAB2Q5VUJ9 269 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 C14orf80Q86SX3 495 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 ADAMTS10Q9H324 1103 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 TOPORSQ9NS56 1045 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 MYOTQ9UBF9 498 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 NOB1Q9ULX3 412 aaKnown RBP6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 INVSQ9Y283 1065 aa6.16□□□□□ -1.42
HMGB3P18-201ENST00000406327 ERC2O15083 957 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 XPOTO43592 962 aaKnown RBP6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 PEX14O75381 377 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 NTRK1P04629 796 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 PF4V1P10720 104 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 PRKCAP17252 672 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 SCAND1P57086 179 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 TMEM132BQ14DG7 1078 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 CLUL1Q15846 466 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 BICRALQ6AI39 1079 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 VSIG10LQ86VR7 867 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 DGKHQ86XP1 1220 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 LILRA2Q8N149 483 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 MORC4Q8TE76 937 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 SH3RF2Q8TEC5 729 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 BCL7CQ8WUZ0 217 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 LMBR1Q8WVP7 490 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 AIFM3Q96NN9 605 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 CD244Q9BZW8 370 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 WNT8AQ9H1J5 351 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 ZMAT4Q9H898 229 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 RCAN3Q9UKA8 241 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 RNF114Q9Y508 228 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 PCDHB4Q9Y5E5 795 aa6.15□□□□□ -1.42
HMGB3P18-201ENST00000406327 FZD9O00144 591 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 DVL2O14641 736 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 KCNK3O14649 394 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 FOXP2O15409 715 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 BUB1BO60566 1050 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PPP1R11O60927 126 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 TADA3O75528 432 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 IL33O95760 270 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PRNPP04156 253 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 MTHFD2P13995 350 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 RAC2P15153 192 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 TAL1P17542 331 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PTPN1P18031 435 aaKnown RBP6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 HERVK_113P62684 666 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 CYP4F8P98187 520 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 MVKQ03426 396 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 BIRC2Q13490 618 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 UBE4AQ14139 1066 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 SNX17Q15036 470 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 RALGPS1Q5JS13 557 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 BTBD8Q5XKL5 378 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 CPZQ66K79 652 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PPP4R4Q6NUP7 873 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PHYKPLQ8IUZ5 450 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 C7orf31Q8N865 590 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 FBXO41Q8TF61 875 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 CLIP3Q96DZ5 547 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 HSPBAP1Q96EW2 488 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PEX11GQ96HA9 241 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 MAML3Q96JK9 1138 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 PDGFDQ9GZP0 370 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 ARNT2Q9HBZ2 717 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 RIC8BQ9NVN3 520 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 ASH2LQ9UBL3 628 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 RIPOR2Q9Y4F9 1068 aa6.14□□□□□ -1.43
HMGB3P18-201ENST00000406327 ARID1BQ8NFD5 2236 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms