RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 ZNF233A6NK53 670 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 STXBP3O00186 592 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 IGF2BP3O00425 579 aaKnown RBP eCLIP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 PPP1R21Q6ZMI0 780 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 CAPN12Q6ZSI9 719 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 ZC3H18Q86VM9 953 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 CCSER1Q9C0I3 900 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 GOLPH3Q9H4A6 298 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 DNAJC17Q9NVM6 304 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 REXO2Q9Y3B8 237 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 L3MBTL1Q9Y468 752 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 USP15Q9Y4E8 981 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 AGPSO00116 658 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 LDHBP07195 334 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 BCRP11274 1271 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 PBX1P40424 430 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 PSMD2Q13200 908 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 CFAP61Q8NHU2 1237 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 GJA10Q969M2 543 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 NUDCD1Q96RS6 583 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 TRIM51Q9BSJ1 452 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 A1CFQ9NQ94 594 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 TYW1Q9NV66 732 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 TRPC6Q9Y210 931 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 KDM3AQ9Y4C1 1321 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 MAPK13O15264 365 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 MSH2P43246 934 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 CYP4F22Q6NT55 531 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 TTI2Q6NXR4 508 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 LRRC34Q8IZ02 419 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 PROM2Q8N271 834 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 PDCD7Q8N8D1 485 aaKnown RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 MIPOL1Q8TD10 442 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 ANKS1AQ92625 1134 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 CEP63Q96MT8 703 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SPZ1Q9BXG8 430 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 TLR10Q9BXR5 811 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SEC31BQ9NQW1 1179 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 STOML1Q9UBI4 398 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 KIAA1024Q9UPX6 916 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 USH1CQ9Y6N9 552 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 HEG1Q9ULI3 1381 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 KIDINS220Q9ULH0 1771 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 PVALEFA0A1B0GWK0 134 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 RCCD1A6NED2 376 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 POC1B-GALNT4F8VUJ3 575 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 EXOC3O60645 756 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 PFDN1O60925 122 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 BRAFP15056 766 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 ATF2P15336 505 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 RANBP1P43487 201 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SH3BGRP55822 239 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 CDK17Q00537 523 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 NAB2Q15742 525 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 MTMR8Q96EF0 704 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 NAP1L4Q99733 375 aaKnown RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 EMILIN3Q9NT22 766 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 MCM8Q9UJA3 840 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 ARL2BPQ9Y2Y0 163 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 ERVV-2B6SEH9 535 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 ECEL1O95672 775 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 HSPA9P38646 679 aaKnown RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 TMED2Q15363 201 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 MEA1Q16626 185 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 FIGNQ5HY92 759 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SH2D4BQ5SQS7 431 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 KCNV1Q6PIU1 500 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SEPT14Q6ZU15 432 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SPATA21Q7Z572 469 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 SRBD1Q8N5C6 995 aaKnown RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 CELF4Q9BZC1 486 aaKnown RBP8.01□□□□□ -1.13
HDAC9-202ENST00000405010 FGFR1OP2Q9NVK5 253 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 GCNT4Q9P109 453 aa8.01□□□□□ -1.13
HDAC9-202ENST00000405010 NBPF26B4DH59 902 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 PODXLO00592 558 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 NMT2O60551 498 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 ATP5HO75947 161 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 AGTP01019 485 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 NQO1P15559 274 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 HIBADHP31937 336 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 PMS1P54277 932 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 EIF6P56537 245 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 KLC1Q07866 573 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 SNX1Q13596 522 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 PDXDC2PQ6P474 469 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 WDR59Q6PJI9 974 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 SPATA24Q86W54 205 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 SLF2Q8IX21 1173 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 SRRM1Q8IYB3 904 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 NBPF15Q8N660 670 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 MAIP1Q8WWC4 291 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 TGS1Q96RS0 853 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms