RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 EBAG9O00559 213 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 MPHOSPH10O00566 681 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 PDXKO00764 312 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 CALUO43852 315 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 MED24O75448 989 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 GYS1P13807 737 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 GNGT1P63211 74 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 KNOP1Q1ED39 458 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 QRICH1Q2TAL8 776 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 HHIPL2Q6UWX4 724 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 IRF2BP2Q7Z5L9 587 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP38Q8NB14 1042 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 MKL1Q969V6 931 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 SPAG5Q96R06 1193 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 METTL14Q9HCE5 456 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 ARMCX3Q9UH62 379 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 NFU1Q9UMS0 254 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.52
CLIP4-204ENST00000404424 GRIN2DO15399 1336 aa11.77□□□□□ -0.52
CLIP4-204ENST00000404424 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.52
CLIP4-204ENST00000404424 RPA1P27694 616 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 PRKCIP41743 596 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
CLIP4-204ENST00000404424 ARID5AQ03989 594 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 GIT2Q14161 759 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 RPS6KA1Q15418 735 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 Q4G0T1 1027 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 EMC10Q5UCC4 262 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 KCTD17Q8N5Z5 321 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 ARL8AQ96BM9 186 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 KRT12Q99456 494 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
CLIP4-204ENST00000404424 UCHL3P15374 230 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 SPIRE1Q08AE8 756 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 DPY19L2P1Q6NXN4 242 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 EPM2AIP1Q7L775 607 aaPredicted RBP11.77□□□□□ -0.53
CLIP4-204ENST00000404424 CATSPER3Q86XQ3 398 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 ETNPPLQ8TBG4 499 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 CRYGNQ8WXF5 182 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 IFT81Q8WYA0 676 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
CLIP4-204ENST00000404424 CCDC43Q96MW1 224 aaKnown RBP11.77□□□□□ -0.53
CLIP4-204ENST00000404424 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 ZHX3Q9H4I2 956 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 PLEKHA4Q9H4M7 779 aa11.77□□□□□ -0.53
CLIP4-204ENST00000404424 LTBP1Q14766 1721 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 MYH4Q9Y623 1939 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 SLC16A3O15427 465 aaKnown RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 FLOT1O75955 427 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 KIF4AO95239 1232 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 MYBP10242 640 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 XRCC5P13010 732 aaKnown RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 RPL13P26373 211 aaKnown RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 PTK2Q05397 1052 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 BMT2Q1RMZ1 405 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 ACTRT1Q8TDG2 376 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 LMBR1Q8WVP7 490 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 BBXQ8WY36 941 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 CALR3Q96L12 384 aaKnown RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 FAM20AQ96MK3 541 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 KANSL2Q9H9L4 492 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 THSD7AQ9UPZ6 1657 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 LTBP4Q8N2S1 1624 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 LRRC37AA6NMS7 1700 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 F8W031 263 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 MEIS2O14770 477 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 CPP00450 1065 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 CCT5P48643 541 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 ARHGAP4P98171 946 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 KDM7AQ6ZMT4 941 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 ZNF571Q7Z3V5 609 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 CASKIN2Q8WXE0 1202 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 ISCUQ9H1K1 167 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 TAF1DQ9H5J8 278 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 TYW1Q9NV66 732 aaKnown RBP11.76□□□□□ -0.53
CLIP4-204ENST00000404424 NAGPAQ9UK23 515 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 INTUQ9ULD6 942 aa11.76□□□□□ -0.53
CLIP4-204ENST00000404424 KIF13BQ9NQT8 1826 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 A0A0A6YYK5 440 aaPredicted RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 KCNK3O14649 394 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 ZEB2O60315 1214 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms