RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 KRT12Q99456 494 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 DHX36Q9H2U1 1008 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CASZ1Q86V15 1759 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SNED1Q8TER0 1413 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RASSF10A6NK89 507 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RSPH10B2B2RC85 870 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ZEB2O60315 1214 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SERPING1P05155 500 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RSPH10BP0C881 870 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CYP11B2P19099 503 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SLC9A1P19634 815 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ABCB4P21439 1286 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ACTN2P35609 894 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RPS6KA1Q15418 735 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 AOC3Q16853 763 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 KCTD16Q68DU8 428 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 C15orf52Q6ZUT6 534 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CATSPER3Q86XQ3 398 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 PROM2Q8N271 834 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CYP2W1Q8TAV3 490 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 U2AF1L4Q8WU68 220 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 NUCKS1Q9H1E3 243 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 EPB41L5Q9HCM4 733 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 FAM53CQ9NYF3 392 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CEP72Q9P209 647 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SIK3Q9Y2K2 1263 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 PHLPP1O60346 1717 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 A0A1W2PQJ5 194 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 MAP2K7O14733 419 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 PPIP5K2O43314 1243 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 NDUFB10O96000 172 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 FECHP22830 423 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 KLRC1P26715 233 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 KCTD19Q17RG1 926 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 ODF2Q5BJF6 829 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 CFAP58Q5T655 872 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 APOBEC3HQ6NTF7 200 aaKnown RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 MIGA2Q7L4E1 593 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 CERKQ8TCT0 537 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 MTMR8Q96EF0 704 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 MED4Q9NPJ6 270 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 BCS1LQ9Y276 419 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 ARAP2Q8WZ64 1704 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 COL16A1Q07092 1604 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 ECE2O60344 883 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 GAS7O60861 476 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 AFPP02771 609 aaKnown RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 MYBP10242 640 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 CHRNA5P30532 468 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 SATB1Q01826 763 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 GABPAQ06546 454 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 FIGNQ5HY92 759 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 LRCH2Q5VUJ6 765 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 CCNI2Q6ZMN8 369 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 TMEM179Q6ZVK1 233 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 PODNQ7Z5L7 613 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 CCDC91Q7Z6B0 441 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 KSR1Q8IVT5 923 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 SCFD1Q8WVM8 642 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 DNAJC19Q96DA6 116 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 MASTLQ96GX5 879 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 REEP2Q9BRK0 252 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 TRIM31Q9BZY9 425 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 TTYH3Q9C0H2 523 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 FAM107BQ9H098 131 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 HOMER2Q9NSB8 354 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 SCAF8Q9UPN6 1271 aaKnown RBP8.43□□□□□ -1.06
HDAC9-201ENST00000401921 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 A0A1B0GUL6 1792 aa8.43□□□□□ -1.06
HDAC9-201ENST00000401921 A0A087X0T9 212 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 GOLGA6L10A6NI86 522 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 RAD17O75943 681 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 GFPT2O94808 682 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 HEXIM1O94992 359 aaKnown RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 FAM228BP0C875 321 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 MYBL2P10244 700 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 USP11P51784 963 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 HHIPL2Q6UWX4 724 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 LRRC55Q6ZSA7 311 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 EGFL6Q8IUX8 553 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 IFT20Q8IY31 132 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 PACSIN1Q9BY11 444 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 PPP1R1BQ9UD71 204 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 FAM184BQ9ULE4 1060 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 IRS2Q9Y4H2 1338 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 TMEM110-MUSTN1A8MSY1 372 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 OPA1O60313 960 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 IVLP07476 585 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 ATP1A2P50993 1020 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 CASP5P51878 434 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 KNOP1Q1ED39 458 aaKnown RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 TMEM119Q4V9L6 283 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 MUM1L1Q5H9M0 696 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms