RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 DDX60LQ5H9U9 1706 aaKnown RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 HNRNPH3P31942 346 aaKnown RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 ASTE1Q2TB18 679 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 CFAP221Q4G0U5 840 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 ZCWPW2Q504Y3 356 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 TRIM31Q9BZY9 425 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 CEP72Q9P209 647 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 AJAP1Q9UKB5 411 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 FAM86B1E9PN63 330 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 SERPING1P05155 500 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 FAM86B2P0C5J1 330 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 ARHGAP4P98171 946 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 CDK17Q00537 523 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 ZC2HC1CQ53FD0 456 aaPredicted RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 PPP4R3AQ6IN85 833 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 APOBEC3HQ6NTF7 200 aaKnown RBP18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 OR2W6PQ8NHA6 318 aa18.7■□□□□ 0.58
SNRNP70-202ENST00000401730 LIG3P49916 1009 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 MMGT1Q8N4V1 131 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 ZIM3Q96PE6 472 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 DHX36Q9H2U1 1008 aaKnown RBP18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 CHORDC1Q9UHD1 332 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 ABCB4P21439 1286 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 MAGEA9P43362 315 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 CRY2Q49AN0 593 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 ZNF571Q7Z3V5 609 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 TRIM59Q8IWR1 403 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 TPH2Q8IWU9 490 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 TEKT1Q969V4 418 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 DNAJC5Q9H3Z4 198 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 TOM1O60784 492 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 SNHG28P0DPA3 235 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 LLGL1Q15334 1064 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 BCAS4Q8TDM0 211 aa18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 FAM163AQ96GL9 167 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 ARMCX3Q9UH62 379 aaPredicted RBP18.69■□□□□ 0.58
SNRNP70-202ENST00000401730 DDX39AO00148 427 aaKnown RBP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 HSF2BPO75031 334 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 AKAP3O75969 853 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 CFBP00751 764 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 IBSPP21815 317 aaPredicted RBP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 NMT1P30419 496 aaKnown RBP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 HPDP32754 393 aaPredicted RBP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 TTMPQ5BVD1 217 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 MAATS1Q7Z4T9 603 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 SEPT12Q8IYM1 358 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 MYH1P12882 1939 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 SPDYE3A6NKU9 549 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 COPB2P35606 906 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 CRKP46108 304 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 AARSP49588 968 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■□□□□ 8.7
SNRNP70-202ENST00000401730 CLK2P49760 499 aaKnown RBP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 JAG1P78504 1218 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 PRPF4BQ13523 1007 aaKnown RBP18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 COG2Q14746 738 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 RUSC1Q9BVN2 902 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 KCTD10Q9H3F6 313 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 DNM3Q9UQ16 869 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 NAV1Q8NEY1 1877 aa18.68■□□□□ 0.58
SNRNP70-202ENST00000401730 GRID2IPA4D2P6 1211 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 GFPT2O94808 682 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 ICA1Q05084 483 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 PSMD2Q13200 908 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 CCDC174Q6PII3 467 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 NT5C3AQ9H0P0 336 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 VIPAS39Q9H9C1 493 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 F5H6K3 240 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 EML1O00423 815 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 MEIS2O14770 477 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 IRAK1P51617 712 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 KLRC3Q07444 240 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 SLC18A3Q16572 532 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 GPATCH4Q5T3I0 446 aaKnown RBP18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 ZNF662Q6ZS27 426 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 TAF4BQ92750 862 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 LRRC27Q9C0I9 530 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 DDX47Q9H0S4 455 aaKnown RBP18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 TDRD3Q9H7E2 651 aaKnown RBP18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 PCDHA2Q9Y5H9 948 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 COL5A3P25940 1745 aaPredicted RBP18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 IGKV6D-41A0A0C4DH26 115 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 BACH1O14867 736 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 RAD51CO43502 376 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 GIT2Q14161 759 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 EXOC3L4Q17RC7 722 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 U2AF1L4Q8WU68 220 aaKnown RBP18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 CASKIN2Q8WXE0 1202 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 CAPS2Q9BXY5 557 aa18.67■□□□□ 0.58
SNRNP70-202ENST00000401730 SMARCA1P28370 1054 aa18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 CFAP58Q5T655 872 aa18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 UCHL3P15374 230 aa18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 HOXD13P35453 343 aa18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 CYP2J2P51589 502 aa18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 RBM46Q8TBY0 533 aaKnown RBP18.66■□□□□ 0.58
SNRNP70-202ENST00000401730 POLRMTO00411 1230 aaKnown RBP18.65■□□□□ 0.58
SNRNP70-202ENST00000401730 GH2P01242 217 aa18.65■□□□□ 0.58
SNRNP70-202ENST00000401730 XRCC5P13010 732 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms