RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 PARD3BQ8TEW8 1205 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 N4BP2L2Q92802 583 aaPredicted RBP6.82□□□□□ -1.32
CLIP4-202ENST00000401605 TCHPQ9BT92 498 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 CCDC68Q9H2F9 335 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 TSPY26PQ9H489 355 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 ZNF304Q9HCX3 659 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 HMG20BQ9P0W2 317 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 SLC45A1Q9Y2W3 748 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 ATRNL1Q5VV63 1379 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 TBKBP1A7MCY6 615 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 TSPAN6O43657 245 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 SGTAO43765 313 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 RTN2O75298 545 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 ATP6V1G1O75348 118 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 GNRH1P01148 92 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 UQCRFS1P1P0C7P4 283 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 USP11P51784 963 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 HDAC4P56524 1084 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 EXOSC10Q01780 885 aaKnown RBP6.82□□□□□ -1.32
CLIP4-202ENST00000401605 MAP3K10Q02779 954 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 NFE2Q16621 373 aaPredicted RBP6.82□□□□□ -1.32
CLIP4-202ENST00000401605 CCDC158Q5M9N0 1113 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 RETREG3Q86VR2 466 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 GAS2L3Q86XJ1 694 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 SPC24Q8NBT2 197 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 ERP27Q96DN0 273 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 SAAL1Q96ER3 474 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 CCDC114Q96M63 670 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 MTRQ99707 1265 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 NRDE2Q9H7Z3 1164 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 ARNT2Q9HBZ2 717 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 GPR108Q9NPR9 543 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 SEPT10Q9P0V9 454 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 MCM8Q9UJA3 840 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 MKL2Q9ULH7 1088 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 MYO6Q9UM54 1294 aa6.82□□□□□ -1.32
CLIP4-202ENST00000401605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.82□□□□□ -1.32
CLIP4-202ENST00000401605 RFX7Q2KHR2 1363 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PHF20L1A8MW92 1017 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PDLIM1O00151 329 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 TBCAO75347 108 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 F12P00748 615 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 RPSAP08865 295 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 POU3F3P20264 500 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 ATP8B2P98198 1209 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 NCBP1Q09161 790 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PICALMQ13492 652 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SQSTM1Q13501 440 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 ITPRIPQ8IWB1 547 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SCYL3Q8IZE3 742 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SMYD1Q8NB12 490 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SSH3Q8TE77 659 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 NSUN4Q96CB9 384 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 NAP1L3Q99457 506 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 OSBPL10Q9BXB5 764 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 HDAC6Q9UBN7 1215 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 XPO7Q9UIA9 1087 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SLC30A1Q9Y6M5 507 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 ZHX2Q9Y6X8 837 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 EME2A4GXA9 379 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 DDTLA6NHG4 134 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PDHXO00330 501 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 IFRD1O00458 451 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 CTNND1O60716 968 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SURF6O75683 361 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 RBP3P10745 1247 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PTPRAP18433 802 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 RPL13P26373 211 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 MCAMP43121 646 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 MAGEA10P43363 369 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PRMT2P55345 433 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 CORO7P57737 925 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 LACTBP83111 547 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 CAP1Q01518 475 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SLC9C1Q4G0N8 1177 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 LRRC23Q53EV4 343 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 TNNI3KQ59H18 835 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 FAM26DQ5JW98 314 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 CFAP58Q5T655 872 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 C17orf99Q6UX52 265 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 CCBE1Q6UXH8 406 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 SH3BP5LQ7L8J4 393 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 FASTKD5Q7L8L6 764 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PAF1Q8N7H5 531 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 ZFPM2Q8WW38 1151 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 USP6NLQ92738 828 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 EMID1Q96A84 441 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 DTNBP1Q96EV8 351 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 PARK7Q99497 189 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 TRIM4Q9C037 500 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 ZSCAN16Q9H4T2 348 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 DDX4Q9NQI0 724 aaKnown RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 AVENQ9NQS1 362 aaPredicted RBP6.81□□□□□ -1.32
CLIP4-202ENST00000401605 LZTS1Q9Y250 596 aa6.81□□□□□ -1.32
CLIP4-202ENST00000401605 FPGT-TNNI3KV9GXZ4 949 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms