RNA–Protein interactions for RNA: ENST00000401498.6

PKDCC-202, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 5

Gene PKDCC, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-202ENST00000401498 HDAC6Q9UBN7 1215 aa33.91■■■■□ 3.02
PKDCC-202ENST00000401498 MARK3P27448 753 aa33.9■■■■□ 3.02
PKDCC-202ENST00000401498 ANP32AP39687 249 aaKnown RBP33.9■■■■□ 3.02
PKDCC-202ENST00000401498 FAM47CQ5HY64 1035 aa33.9■■■■□ 3.02
PKDCC-202ENST00000401498 SESTD1Q86VW0 696 aa33.9■■■■□ 3.02
PKDCC-202ENST00000401498 FAM126BQ8IXS8 530 aa33.9■■■■□ 3.02
PKDCC-202ENST00000401498 MROH7Q68CQ1 1323 aa33.9■■■■□ 3.02
PKDCC-202ENST00000401498 PTPN11Q06124 597 aaPredicted RBP33.89■■■■□ 3.02
PKDCC-202ENST00000401498 C7orf31Q8N865 590 aa33.89■■■■□ 3.02
PKDCC-202ENST00000401498 GABBR1Q9UBS5 961 aa33.89■■■■□ 3.02
PKDCC-202ENST00000401498 MAFBQ9Y5Q3 323 aaPredicted RBP33.89■■■■□ 3.02
PKDCC-202ENST00000401498 EVI5O60447 810 aa33.89■■■■□ 3.02
PKDCC-202ENST00000401498 FAM160B1Q5W0V3 765 aa33.89■■■■□ 3.02
PKDCC-202ENST00000401498 MYH15Q9Y2K3 1946 aa33.89■■■■□ 3.02
PKDCC-202ENST00000401498 ATP4AP20648 1035 aa33.88■■■■□ 3.01
PKDCC-202ENST00000401498 NCAPH2Q6IBW4 605 aa33.88■■■■□ 3.01
PKDCC-202ENST00000401498 C7orf61Q8IZ16 206 aa33.88■■■■□ 3.01
PKDCC-202ENST00000401498 TRPV6Q9H1D0 765 aa33.88■■■■□ 3.01
PKDCC-202ENST00000401498 GTF2IRD1Q9UHL9 959 aa33.88■■■■□ 3.01
PKDCC-202ENST00000401498 B4GALT4O60513 344 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 F13A1P00488 732 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 CD4P01730 458 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 SMIM10L2AP0DMW4 78 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 SMIM10L2BP0DMW5 78 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 FAAP100Q0VG06 881 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 HIC1Q14526 733 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 PDXDC2PQ6P474 469 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 TRMT13Q9NUP7 481 aaKnown RBP33.87■■■■□ 3.01
PKDCC-202ENST00000401498 TRIP12Q14669 1992 aaPredicted RBP33.87■■■■□ 3.01
PKDCC-202ENST00000401498 IGSF9BQ9UPX0 1349 aa33.87■■■■□ 3.01
PKDCC-202ENST00000401498 KAT6AQ92794 2004 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 DCDC2CA8MYV0 355 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 LAD1O00515 517 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 TECP42680 631 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 SLC26A2P50443 739 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 ATP2C1P98194 919 aaPredicted RBP33.86■■■■□ 3.01
PKDCC-202ENST00000401498 PLCB4Q15147 1175 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 UGCGQ16739 394 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 GDF6Q6KF10 455 aaPredicted RBP33.86■■■■□ 3.01
PKDCC-202ENST00000401498 FTOQ9C0B1 505 aaKnown RBP eCLIP33.86■■■■□ 3.013e-6■■□□□ 14.1
PKDCC-202ENST00000401498 ZDHHC9Q9Y397 364 aa33.86■■■■□ 3.01
PKDCC-202ENST00000401498 POTEMA6NI47 508 aa33.85■■■■□ 3.01
PKDCC-202ENST00000401498 BRD1O95696 1058 aa33.85■■■■□ 3.01
PKDCC-202ENST00000401498 HOXC8P31273 242 aa33.85■■■■□ 3.01
PKDCC-202ENST00000401498 EPHA7Q15375 998 aa33.85■■■■□ 3.01
PKDCC-202ENST00000401498 SF3A1Q15459 793 aaKnown RBP33.85■■■■□ 3.01
PKDCC-202ENST00000401498 PDE4DIPQ5VU43 2346 aa33.85■■■■□ 3.01
PKDCC-202ENST00000401498 ZNF862O60290 1169 aa33.84■■■■□ 3.01
PKDCC-202ENST00000401498 PRPHP41219 470 aa33.84■■■■□ 3.01
PKDCC-202ENST00000401498 IL17AQ16552 155 aa33.84■■■■□ 3.01
PKDCC-202ENST00000401498 CTAGE1Q96RT6 745 aa33.84■■■■□ 3.01
PKDCC-202ENST00000401498 SETD4Q9NVD3 440 aa33.84■■■■□ 3.01
PKDCC-202ENST00000401498 CLIC4Q9Y696 253 aa33.84■■■■□ 3.01
PKDCC-202ENST00000401498 FXR2P51116 673 aaKnown RBP eCLIP33.83■■■■□ 3.01
PKDCC-202ENST00000401498 ZNF200P98182 395 aaPredicted RBP33.83■■■■□ 3.01
PKDCC-202ENST00000401498 BANK1Q8NDB2 785 aa33.83■■■■□ 3.01
PKDCC-202ENST00000401498 PDLIM7Q9NR12 457 aa33.83■■■■□ 3.01
PKDCC-202ENST00000401498 POTEB3A0JP26 581 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 TLR3O15455 904 aaKnown RBP33.82■■■■□ 3
PKDCC-202ENST00000401498 CLTBP09497 229 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 DDIT3P35638 169 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 POTEBQ6S5H4 581 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 SH3RF1Q7Z6J0 888 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 ATP8B4Q8TF62 1192 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 TRPC6Q9Y210 931 aa33.82■■■■□ 3
PKDCC-202ENST00000401498 PTGISQ16647 500 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 USP28Q96RU2 1077 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 RGL1Q9NZL6 768 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 NRCAMQ92823 1304 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 C17orf102A2RUQ5 167 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 P4HBP07237 508 aaKnown RBP33.81■■■■□ 3
PKDCC-202ENST00000401498 INSRRP14616 1297 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 ADAM17P78536 824 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 TMEM266Q2M3C6 531 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 TRMT1LQ7Z2T5 733 aaKnown RBP33.81■■■■□ 3
PKDCC-202ENST00000401498 CKAP2LQ8IYA6 745 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 LMBR1Q8WVP7 490 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 ATP6V0A1Q93050 837 aa33.81■■■■□ 3
PKDCC-202ENST00000401498 EIF2AK1Q9BQI3 630 aaKnown RBP33.81■■■■□ 3
PKDCC-202ENST00000401498 BMP15O95972 392 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 PSMC5P62195 406 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 PPFIA1Q13136 1202 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 PTPAQ15257 358 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 ARL6IP4Q66PJ3 421 aaKnown RBP33.8■■■■□ 3
PKDCC-202ENST00000401498 DTHD1Q6ZMT9 781 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 DYDC2Q96IM9 177 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 HSD17B14Q9BPX1 270 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 WRAP73Q9P2S5 460 aaPredicted RBP33.8■■■■□ 3
PKDCC-202ENST00000401498 CEP131Q9UPN4 1083 aa33.8■■■■□ 3
PKDCC-202ENST00000401498 TRIM43BA6NCK2 446 aa33.79■■■■□ 3
PKDCC-202ENST00000401498 QARSP47897 775 aaKnown RBP33.79■■■■□ 3
PKDCC-202ENST00000401498 PRKCEQ02156 737 aa33.79■■■■□ 3
PKDCC-202ENST00000401498 CEBPZQ03701 1054 aaKnown RBP33.79■■■■□ 3
PKDCC-202ENST00000401498 GRIK4Q16099 956 aa33.79■■■■□ 3
PKDCC-202ENST00000401498 IGSF22Q8N9C0 903 aa33.79■■■■□ 3
PKDCC-202ENST00000401498 BBXQ8WY36 941 aaPredicted RBP33.79■■■■□ 3
PKDCC-202ENST00000401498 TRIM43Q96BQ3 446 aaPredicted RBP33.79■■■■□ 3
PKDCC-202ENST00000401498 TMEM39AQ9NV64 488 aa33.79■■■■□ 3
PKDCC-202ENST00000401498 PCDH10Q9P2E7 1040 aa33.79■■■■□ 3
PKDCC-202ENST00000401498 TBX21Q9UL17 535 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms