RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 USP49Q70CQ1 688 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 PCSK9Q8NBP7 692 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 PPP1R13LQ8WUF5 828 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 FERMT2Q96AC1 680 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 PAWRQ96IZ0 340 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 SPATA32Q96LK8 384 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 EIF2AK1Q9BQI3 630 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 TSEN34Q9BSV6 310 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 MMTAG2Q9BU76 263 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 RNPEPQ9H4A4 650 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 PCDHA7Q9UN72 937 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 MAFBQ9Y5Q3 323 aaPredicted RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 H3BRB1 525 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 ZNF862O60290 1169 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 PSAPP07602 524 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 SPATA31C1P0DKV0 1188 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 COL6A1P12109 1028 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 STAT5BP51692 787 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 CYP4A11Q02928 519 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 ECM1Q16610 540 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 KRI1Q8N9T8 703 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 ANKLE1Q8NAG6 615 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 BANK1Q8NDB2 785 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 RDM1Q8NG50 284 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 KCNG4Q8TDN1 519 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 TUT1Q9H6E5 874 aaKnown RBP17.92■□□□□ 0.46
HMGA1-204ENST00000401473 GABBR1Q9UBS5 961 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 TCEAL9Q9UHQ7 104 aa17.92■□□□□ 0.46
HMGA1-204ENST00000401473 KAT6AQ92794 2004 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 BACH1O14867 736 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 CAPN15O75808 1086 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 F2P00734 622 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 TRMT1LQ7Z2T5 733 aaKnown RBP17.91■□□□□ 0.46
HMGA1-204ENST00000401473 CATSPER3Q86XQ3 398 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 AFAP1L1Q8TED9 768 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 GLG1Q92896 1179 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 DYDC2Q96IM9 177 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 EPSTI1Q96J88 318 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 SCAND2PQ9GZW5 306 aaPredicted RBP17.91■□□□□ 0.46
HMGA1-204ENST00000401473 TRIP12Q14669 1992 aaPredicted RBP17.91■□□□□ 0.46
HMGA1-204ENST00000401473 GRIN2DO15399 1336 aa17.91■□□□□ 0.46
HMGA1-204ENST00000401473 MOXD2PA6NHM9 499 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 KBTBD13C9JR72 458 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 ZEB2O60315 1214 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 MED24O75448 989 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 LONP1P36776 959 aaKnown RBP17.9■□□□□ 0.46
HMGA1-204ENST00000401473 PSMC6P62333 389 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 CTTNQ14247 550 aaKnown RBP17.9■□□□□ 0.46
HMGA1-204ENST00000401473 PLPPR4Q7Z2D5 763 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 SMARCAD1Q9H4L7 1026 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 ZNF302Q9NR11 478 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 PHF24Q9UPV7 400 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 EMSYQ7Z589 1322 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 A0A087WWV3 80 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 A0A1W2PQ45 241 aaPredicted RBP17.9■□□□□ 0.46
HMGA1-204ENST00000401473 A0A1W2PQY0 241 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 HAS3O00219 553 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 ZBTB39O15060 712 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 KPNA6O60684 536 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 P4HBP07237 508 aaKnown RBP17.9■□□□□ 0.46
HMGA1-204ENST00000401473 MARK3P27448 753 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 ME1P48163 572 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 PDXDC2PQ6P474 469 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 AZI2Q9H6S1 392 aa17.9■□□□□ 0.46
HMGA1-204ENST00000401473 STBD1O95210 358 aa17.89■□□□□ 0.45
HMGA1-204ENST00000401473 RPA1P27694 616 aa17.89■□□□□ 0.45
HMGA1-204ENST00000401473 QARSP47897 775 aaKnown RBP17.89■□□□□ 0.45
HMGA1-204ENST00000401473 SHC4Q6S5L8 630 aa17.89■□□□□ 0.45
HMGA1-204ENST00000401473 TPH2Q8IWU9 490 aa17.89■□□□□ 0.45
HMGA1-204ENST00000401473 AK8Q96MA6 479 aa17.89■□□□□ 0.45
HMGA1-204ENST00000401473 MTG1Q9BT17 334 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-204ENST00000401473 SENP6Q9GZR1 1112 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-204ENST00000401473 ERAP1Q9NZ08 941 aa17.89■□□□□ 0.45
HMGA1-204ENST00000401473 CAPN2P17655 700 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 CHMP4BP1P59074 171 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 CLEC17AQ6ZS10 378 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 GLT1D1Q96MS3 346 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 LXNQ9BS40 222 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 IGSF9BQ9UPX0 1349 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 LAMA2P24043 3122 aaKnown RBP17.88■□□□□ 0.45
HMGA1-204ENST00000401473 CUTAO60888 179 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 PSMC5P62195 406 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 NBPF20Q3BBV1 942 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
HMGA1-204ENST00000401473 SNX29Q8TEQ0 813 aa17.88■□□□□ 0.45
HMGA1-204ENST00000401473 SYMPKQ92797 1274 aaKnown RBP17.88■□□□□ 0.45
HMGA1-204ENST00000401473 POLR3CQ9BUI4 534 aaPredicted RBP17.88■□□□□ 0.45
HMGA1-204ENST00000401473 POTEB3A0JP26 581 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 TMEM150BA6NC51 233 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 PSEN2P49810 448 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 HIC1Q14526 733 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 MFSD10Q14728 455 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 PLCB4Q15147 1175 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 FAM160B1Q5W0V3 765 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 KRT79Q5XKE5 535 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 POTEBQ6S5H4 581 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 NECAB2Q7Z6G3 386 aa17.87■□□□□ 0.45
HMGA1-204ENST00000401473 VTI1AQ96AJ9 217 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms