RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 GRB10Q13322 594 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 GRIK4Q16099 956 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 MARCH8Q5T0T0 291 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 NME8Q8N427 588 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 ARNTL2Q8WYA1 636 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 GLG1Q92896 1179 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 RNF26Q9BY78 433 aaPredicted RBP16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 IFIH1Q9BYX4 1025 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 AZI2Q9H6S1 392 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 AGO4Q9HCK5 861 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
SMARCE1-204ENST00000400122 WDR81Q562E7 1941 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 EPOPA6NHQ4 379 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 ARHGEF15O94989 841 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 CHRNA1P02708 482 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 RPS6KB1P23443 525 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 FGD1P98174 961 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 PCYT2Q99447 389 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 SH3GLB2Q9NR46 395 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 TELO2Q9Y4R8 837 aa16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
SMARCE1-204ENST00000400122 LCHNA4D1U4 455 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 IFNAR1P17181 557 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 CIITAP33076 1130 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 STAT5BP51692 787 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 ACTR2P61160 394 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 NTRK3Q16288 839 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 IER5Q5VY09 327 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.242e-7■■□□□ 13.5
SMARCE1-204ENST00000400122 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 ZNF710Q8N1W2 664 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 FTHL17Q9BXU8 183 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 TBC1D22BQ9NU19 505 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.24
SMARCE1-204ENST00000400122 NLRC5Q86WI3 1866 aa16.52■□□□□ 0.23
SMARCE1-204ENST00000400122 COL1A2P08123 1366 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 IGLV3-22A0A075B6J6 115 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 SMIM35A0A1B0GVV1 85 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 BMP1P13497 986 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 INSRRP14616 1297 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 SP4Q02446 784 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 ITGB3BPQ13352 177 aaPredicted RBP16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 PKN1Q16512 942 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 FBXO47Q5MNV8 452 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 ABHD15Q6UXT9 468 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 TSHZ1Q6ZSZ6 1077 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 Q6ZUG5 572 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 MYOCDQ8IZQ8 938 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 CYP2W1Q8TAV3 490 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 BRF1Q92994 677 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 PRDM6Q9NQX0 595 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 RWDD3Q9Y3V2 267 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 LOXHD1Q8IVV2 1947 aa16.51■□□□□ 0.23
SMARCE1-204ENST00000400122 EVPLQ92817 2033 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 C5orf67F2Z3F1 127 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 DHX15O43143 795 aaKnown RBP16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 HBP1O60381 514 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 ARP10275 920 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 MRPS6P82932 125 aaKnown RBP16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 LPIN1Q14693 890 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 CCDC85BQ15834 202 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 ZNF746Q6NUN9 644 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 SKAP1Q86WV1 359 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 PPM1EQ8WY54 764 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
SMARCE1-204ENST00000400122 POTEB3A0JP26 581 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 FAM86B1E9PN63 330 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 IPO5O00410 1097 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 RB1P06400 928 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 CTSHP09668 335 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 FAM86B2P0C5J1 330 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 ZNF76P36508 570 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 USP11P51784 963 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 AKAP17AQ02040 695 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 PLCB4Q15147 1175 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 POTEBQ6S5H4 581 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 RUFY4Q6ZNE9 571 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SMARCE1-204ENST00000400122 ATP8B4Q8TF62 1192 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms