RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 YWHAQP27348 245 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 ALDH18A1P54886 795 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 TIGD7Q6NT04 549 aaPredicted RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 DNAJC7Q99615 494 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 MYH6P13533 1939 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 TBC1D32Q96NH3 1257 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 EML4Q9HC35 981 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 CIDEBQ9UHD4 219 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 HPCAP84074 193 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TCP1P17987 556 aaKnown RBP9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 HSPA13P48723 471 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 IST1P53990 364 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 FCHO2Q0JRZ9 810 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TTC13Q8NBP0 860 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SLC7A5P2Q9GIP4 190 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 A8MXQ7 604 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ZNF394Q53GI3 561 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ENKURQ8TC29 256 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SCN8AQ9UQD0 1980 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 KIAA0408Q6ZU52 694 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 MED10Q9BTT4 135 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 CABLES1Q8TDN4 633 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 GOLPH3LQ9H4A5 285 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ARMCX3Q9UH62 379 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 APOC1P02654 83 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 IYDQ6PHW0 289 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SERHL2Q9H4I8 314 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 WWP2O00308 870 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 PDE6CP51160 858 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ST5P78524 1137 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TRIQKQ629K1 86 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 NEK8Q86SG6 692 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 CDC26Q8NHZ8 85 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 PANK2Q9BZ23 570 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 IL1RAPL2Q9NP60 686 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 METTL21EPA6NDL7 271 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 LSM1O15116 133 aaKnown RBP9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 MSH3P20585 1137 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 NCALDP61601 193 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 GATAD2AQ86YP4 633 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ZNF483Q8TF39 744 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 GCNAQ96QF7 691 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SUPT3HO75486 399 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TOM1L1O75674 476 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ATP1A2P50993 1020 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 ARMCX5Q6P1M9 558 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 GIMAP6Q6P9H5 292 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 KPNA7A9QM74 516 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 H0Y3Z8 333 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 CYP2C19P33261 490 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 MEI1Q5TIA1 1274 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SYT2Q8N9I0 419 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 DHX58Q96C10 678 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 MAGEB5Q9BZ81 275 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 DMPKQ09013 629 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 UBXN6Q9BZV1 441 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 SLC5A4Q9NY91 659 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 TMCC3Q9ULS5 477 aa9.18□□□□□ -0.94
CACNA1C-220ENST00000399655 CTNND1O60716 968 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 MYL6BP14649 208 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 GJA1P17302 382 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 ITGA1P56199 1179 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 GPR101Q96P66 508 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 CCDC177Q9NQR7 707 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 CTNND2Q9UQB3 1225 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 KLHL30Q0D2K2 578 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 POTEAQ6S8J7 498 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 PIK3R2O00459 728 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 STAT1P42224 750 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 CCT5P48643 541 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 TRADDQ15628 312 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 MAPRE1Q15691 268 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 FAM210AQ96ND0 272 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 C1orf112Q9NSG2 853 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 ECE2O60344 883 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 SSH1Q8WYL5 1049 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 CNPY3Q9BT09 278 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 KATNAL1Q9BW62 490 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 MTTPP55157 894 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 ADCK5Q3MIX3 580 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 WDR36Q8NI36 951 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 OTUD5Q96G74 571 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 OSBPL9Q96SU4 736 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 AZI2Q9H6S1 392 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 MAGEA9P43362 315 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 GUCY2FP51841 1108 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 CALR3Q96L12 384 aaKnown RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 VPS35Q96QK1 796 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 SPINK5Q9NQ38 1064 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 HESX1Q9UBX0 185 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 CUL1Q13616 776 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 NFYCQ13952 458 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 LIN54Q6MZP7 749 aa9.17□□□□□ -0.94
CACNA1C-220ENST00000399655 PDCD4Q53EL6 469 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms