RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GRIK1P39086 918 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 PHKA2P46019 1235 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ASPRV1Q53RT3 343 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ARHGEF18Q6ZSZ5 1173 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 IGSF22Q8N9C0 903 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 GJA10Q969M2 543 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 SH3BP1Q9Y3L3 701 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 RALAP11233 206 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 CHRNA5P30532 468 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 MFAP3P55082 362 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 VSIG1Q86XK7 387 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 SPON2Q9BUD6 331 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 MSTO1Q9BUK6 570 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 ZNF212Q9UDV6 495 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 RPS6KB1P23443 525 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 DYNLT1P63172 113 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 LRGUKQ96M69 825 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 COA1Q9GZY4 146 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM207AQ9NSI2 230 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 GPC4O75487 556 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 MOCS2O96007 188 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 PRR23CQ6ZRP0 262 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 RNF180Q86T96 592 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 RHPN2Q8IUC4 686 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM186BQ8IYM0 893 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 P3H4Q92791 437 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 ABHD8Q96I13 439 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 NUDCD1Q96RS6 583 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 YME1L1Q96TA2 773 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 GCOM2Q9BZD3 368 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 KLF15Q9UIH9 416 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 DRP2Q13474 957 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 GRAPQ13588 217 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 TRIM14Q14142 442 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 ANO1Q5XXA6 986 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 GJD4Q96KN9 370 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 NUP58Q9BVL2 599 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 AMFRQ9UKV5 643 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 EEF1B2P24534 225 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 COPB2P35606 906 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 KRT80Q6KB66 452 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 C8orf74Q6P047 294 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM173BQ6P4H8 233 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 VCX3AQ9NNX9 186 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
CACNA1C-216ENST00000399638 MEIS1O00470 390 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 ACADMP11310 421 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 GCKP35557 465 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 PDE1BQ01064 536 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 HDXQ7Z353 690 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 SLC27A2O14975 620 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 EVI5O60447 810 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 CCL15Q16663 113 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 GPATCH4Q5T3I0 446 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 OTUD7AQ8TE49 926 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM47DPA6NHR8 397 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 GH2P01242 217 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 E4F1Q66K89 784 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 GRK7Q8WTQ7 553 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 EDEM3Q9BZQ6 932 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 SERPINB13Q9UIV8 391 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 TMCC1O94876 653 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 CAPZA2P47755 286 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 SPP2Q13103 211 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 NT5DC4Q86YG4 428 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 PIP4K2CQ8TBX8 421 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 PALMDQ9NP74 551 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 ZNF148Q9UQR1 794 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 AGRPO00253 132 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 OR52Z1P0C646 297 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 STX1BP61266 288 aa11.79□□□□□ -0.52
CACNA1C-216ENST00000399638 DYNLL1P63167 89 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms