RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 WLSQ5T9L3 541 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 CPLX4Q7Z7G2 160 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 REXO1Q8N1G1 1221 aaKnown RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 CELF1Q92879 486 aaKnown RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 SGSM3Q96HU1 749 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 DPH5Q9H2P9 285 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 KRIT1O00522 736 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 C21orf2O43822 256 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 ACTN1P12814 892 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 EPS15P42566 896 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 USP11P51784 963 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 PTK2Q05397 1052 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 ZCWPW2Q504Y3 356 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 FBXO33Q7Z6M2 555 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 MDM1Q8TC05 714 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.3■□□□□ 0.04
APOB-202ENST00000399256 GJA10Q969M2 543 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 MTMR9Q96QG7 549 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 PIGSQ96S52 555 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 BSDC1Q9NW68 430 aaPredicted RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 ECM1Q16610 540 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 DZIP1Q86YF9 867 aaKnown RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 PROM2Q8N271 834 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 EP400NLQ6ZTU2 488 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 TATDN2Q93075 761 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 HVCN1Q96D96 273 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 PBKQ96KB5 322 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 TRIM31Q9BZY9 425 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 SEC63Q9UGP8 760 aaKnown RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 TTI1O43156 1089 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 DHX9Q08211 1270 aaKnown RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 AGBL2Q5U5Z8 902 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 GKAP1Q5VSY0 366 aaPredicted RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 C3orf20Q8ND61 904 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 ACTRT1Q8TDG2 376 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 TACO1Q9BSH4 297 aaKnown RBP15.29■□□□□ 0.04
APOB-202ENST00000399256 GANQ9H2C0 597 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 PANK4Q9NVE7 773 aa15.29■□□□□ 0.04
APOB-202ENST00000399256 ECM2O94769 699 aaPredicted RBP15.28■□□□□ 0.04
APOB-202ENST00000399256 HIBADHP31937 336 aaKnown RBP15.28■□□□□ 0.04
APOB-202ENST00000399256 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
APOB-202ENST00000399256 PSMD2Q13200 908 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 FAM26FQ5R3K3 315 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 UBA5Q9GZZ9 404 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 LY75O60449 1722 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 C5orf60A6NFR6 353 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 KIF1CO43896 1103 aaKnown RBP15.28■□□□□ 0.04
APOB-202ENST00000399256 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 TRIM59Q8IWR1 403 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 EIF1ADQ8N9N8 165 aaKnown RBP15.28■□□□□ 0.04
APOB-202ENST00000399256 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.047e-41■■■■□ 21.9
APOB-202ENST00000399256 SPZ1Q9BXG8 430 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 MYH4Q9Y623 1939 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 CCDC88AQ3V6T2 1871 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 DRD4P21917 467 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 IFFO1Q0D2I5 559 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 LRRC57Q8N9N7 239 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 DNAJC19Q96DA6 116 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 LZTS2Q9BRK4 669 aa15.28■□□□□ 0.04
APOB-202ENST00000399256 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.04
APOB-202ENST00000399256 FAM170AA1A519 330 aa15.27■□□□□ 0.04
APOB-202ENST00000399256 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
APOB-202ENST00000399256 CES2O00748 559 aa15.27■□□□□ 0.04
APOB-202ENST00000399256 PSMD1Q99460 953 aa15.27■□□□□ 0.04
APOB-202ENST00000399256 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.04
APOB-202ENST00000399256 F8VZ95 297 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 PAEPP09466 180 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 EZRP15311 586 aaKnown RBP15.27■□□□□ 0.03
APOB-202ENST00000399256 PEX26Q7Z412 305 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 FBXO41Q8TF61 875 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 CCT6BQ92526 530 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 COA7Q96BR5 231 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 SPAG5Q96R06 1193 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 TRIM51Q9BSJ1 452 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 PNMA2Q9UL42 364 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 EP400Q96L91 3159 aa15.27■□□□□ 0.03
APOB-202ENST00000399256 F8W031 263 aaPredicted RBP15.26■□□□□ 0.03
APOB-202ENST00000399256 SLC9A1P19634 815 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 TMEM119Q4V9L6 283 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 LACTB2Q53H82 288 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms