RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 AZI2Q9H6S1 392 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 ZNF302Q9NR11 478 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 DISC1Q9NRI5 854 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 PCDHA12Q9UN75 941 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 ATP11BQ9Y2G3 1177 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 TCHHQ07283 1943 aa11.78□□□□□ -0.52
CYCSP55-201ENST00000399027 EML1O00423 815 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 TLR3O15455 904 aaKnown RBP11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 B4GALT4O60513 344 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 PRPHP41219 470 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 TLE2Q04725 743 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 PTGDRQ13258 359 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 FAM160B1Q5W0V3 765 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 MIER3Q7Z3K6 550 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 FERMT3Q86UX7 667 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 C7orf31Q8N865 590 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 DPF3Q92784 378 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 GLG1Q92896 1179 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 RNPEPQ9H4A4 650 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 TTC12Q9H892 705 aaPredicted RBP11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 EVPLQ92817 2033 aa11.77□□□□□ -0.53
CYCSP55-201ENST00000399027 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 CHMP2AO43633 222 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 MARCH6O60337 910 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 PQBP1O60828 265 aaKnown RBP11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 CLTBP09497 229 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 SMIM10L2AP0DMW4 78 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 SMIM10L2BP0DMW5 78 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 ZSCAN22P10073 491 aaPredicted RBP11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 ATP4AP20648 1035 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 TXKP42681 527 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 ADAM17P78536 824 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 ATP2C1P98194 919 aaPredicted RBP11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 PKP1Q13835 747 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 HIC1Q14526 733 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 PLCB4Q15147 1175 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 EPHA7Q15375 998 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 GDF6Q6KF10 455 aaPredicted RBP11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 C7orf61Q8IZ16 206 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 TNPO1Q92973 898 aaKnown RBP11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 PDLIM7Q9NR12 457 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 GABBR1Q9UBS5 961 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 SCN5AQ14524 2016 aa11.76□□□□□ -0.53
CYCSP55-201ENST00000399027 C17orf102A2RUQ5 167 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 BACH1O14867 736 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 KIAA0355O15063 1070 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 F13A1P00488 732 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 MARK3P27448 753 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 PTGISQ16647 500 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 UGCGQ16739 394 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 FAM47CQ5HY64 1035 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 ARL6IP4Q66PJ3 421 aaKnown RBP11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 PDXDC2PQ6P474 469 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 NEK9Q8TD19 979 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 PPP1R13LQ8WUF5 828 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 BBXQ8WY36 941 aaPredicted RBP11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 ATP6V0A1Q93050 837 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 TRPV6Q9H1D0 765 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 TRMT13Q9NUP7 481 aaKnown RBP11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 MORC2Q9Y6X9 1032 aaPredicted RBP11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 COL1A2P08123 1366 aa11.75□□□□□ -0.53
CYCSP55-201ENST00000399027 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 MBLAC1A4D2B0 266 aaPredicted RBP11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 POTEMA6NI47 508 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 ZNF862O60290 1169 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 HBP1O60381 514 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 STBD1O95210 358 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 BRD1O95696 1058 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 BMP15O95972 392 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 GNAT1P11488 350 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 DDIT3P35638 169 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 TECP42680 631 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 PSMC5P62195 406 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 RBL2Q08999 1139 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 PDIA5Q14554 519 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 IL17AQ16552 155 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 TMEM266Q2M3C6 531 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 NCAPH2Q6IBW4 605 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 SH3RF1Q7Z6J0 888 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 LMBR1Q8WVP7 490 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 FAM167AQ96KS9 214 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 HSD17B14Q9BPX1 270 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 CEP131Q9UPN4 1083 aa11.74□□□□□ -0.53
CYCSP55-201ENST00000399027 TRIM43BA6NCK2 446 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 RRN3P2A6NIE6 340 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms