RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 RPLP2P05387 115 aaKnown RBP12.72□□□□□ -0.37
SRMP1-201ENST00000398959 CTNNB1P35222 781 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 MGAT3Q09327 533 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 LPIN1Q14693 890 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 MARCH8Q5T0T0 291 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 WWC2Q6AWC2 1192 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 APOA5Q6Q788 366 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 TSHZ1Q6ZSZ6 1077 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 TNPO1Q92973 898 aaKnown RBP12.72□□□□□ -0.37
SRMP1-201ENST00000398959 NEK1Q96PY6 1258 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 MXRA8Q9BRK3 442 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 SDF4Q9BRK5 362 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 FAM49AQ9H0Q0 323 aaPredicted RBP12.72□□□□□ -0.37
SRMP1-201ENST00000398959 EPHX3Q9H6B9 360 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 KCNH7Q9NS40 1196 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 CDY2AQ9Y6F7 541 aa12.72□□□□□ -0.37
SRMP1-201ENST00000398959 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 M0QZ92 97 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 INSRRP14616 1297 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 ADCY7P51828 1080 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 MRPS6P82932 125 aaKnown RBP12.71□□□□□ -0.37
SRMP1-201ENST00000398959 RTN1Q16799 776 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 IER5Q5VY09 327 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 PTCRAQ6ISU1 281 aaPredicted RBP12.71□□□□□ -0.37
SRMP1-201ENST00000398959 PPP1R18Q6NYC8 613 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
SRMP1-201ENST00000398959 PGBD1Q96JS3 809 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
SRMP1-201ENST00000398959 RIC8AQ9NPQ8 531 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 RWDD3Q9Y3V2 267 aa12.71□□□□□ -0.37
SRMP1-201ENST00000398959 NFASCO94856 1347 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 ENPP3O14638 875 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 ZBTB43O43298 467 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 FOSP01100 380 aaPredicted RBP12.7□□□□□ -0.38
SRMP1-201ENST00000398959 IL9P15248 144 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
SRMP1-201ENST00000398959 ACTR2P61160 394 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
SRMP1-201ENST00000398959 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
SRMP1-201ENST00000398959 TCEAL5Q5H9L2 206 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 CYP2W1Q8TAV3 490 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 ZBTB10Q96DT7 871 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 PCYT2Q99447 389 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
SRMP1-201ENST00000398959 ANO3Q9BYT9 981 aa12.7□□□□□ -0.38
SRMP1-201ENST00000398959 NAP1L2Q9ULW6 460 aaPredicted RBP12.7□□□□□ -0.38
SRMP1-201ENST00000398959 SMCO2A6NFE2 343 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 GOLGA8AA7E2F4 631 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 C5orf67F2Z3F1 127 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
SRMP1-201ENST00000398959 hCG_1984214I3L0E3 225 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 STXBP3O00186 592 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 RB1P06400 928 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 ARP10275 920 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 CD52P31358 61 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 ZNF76P36508 570 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 BMPR1AP36894 532 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 STAT5BP51692 787 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 CEP55Q53EZ4 464 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 TYW1BQ6NUM6 668 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 DHX32Q7L7V1 743 aaKnown RBP12.69□□□□□ -0.38
SRMP1-201ENST00000398959 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 GJD3Q8N144 294 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 ZNF713Q8N859 430 aaPredicted RBP12.69□□□□□ -0.38
SRMP1-201ENST00000398959 NEK9Q8TD19 979 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 TRAPPC12Q8WVT3 735 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
SRMP1-201ENST00000398959 PABPC5Q96DU9 382 aaKnown RBP12.69□□□□□ -0.38
SRMP1-201ENST00000398959 FAM122AQ96E09 287 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 FTHL17Q9BXU8 183 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 CD320Q9NPF0 282 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 CLDND1Q9NY35 253 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 FAM50BQ9Y247 325 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 HCN4Q9Y3Q4 1203 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 TRPV2Q9Y5S1 764 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 SQORQ9Y6N5 450 aa12.69□□□□□ -0.38
SRMP1-201ENST00000398959 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
SRMP1-201ENST00000398959 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 CSPG5O95196 566 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 PLA2G5P39877 138 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 FGD1P98174 961 aa12.68□□□□□ -0.38
SRMP1-201ENST00000398959 EXOSC10Q01780 885 aaKnown RBP12.68□□□□□ -0.38
SRMP1-201ENST00000398959 PAK2Q13177 524 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms