RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 DHX38Q92620 1227 aaKnown RBP17.8■□□□□ 0.44
MBD1-207ENST00000398488 TMEM39AQ9NV64 488 aa17.8■□□□□ 0.44
MBD1-207ENST00000398488 GABBR1Q9UBS5 961 aa17.8■□□□□ 0.44
MBD1-207ENST00000398488 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
MBD1-207ENST00000398488 NR2E3Q9Y5X4 410 aa17.8■□□□□ 0.44
MBD1-207ENST00000398488 WDR64B1ANS9 1081 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 BACH1O14867 736 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 KIAA0355O15063 1070 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 TXKP42681 527 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 TRAPPC10P48553 1259 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 ADAM17P78536 824 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 PTPN11Q06124 597 aaPredicted RBP17.79■□□□□ 0.44
MBD1-207ENST00000398488 PPP2R5CQ13362 524 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 MIS18BP1Q6P0N0 1132 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 PLPPR4Q7Z2D5 763 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 SMAP1Q8IYB5 467 aaPredicted RBP17.79■□□□□ 0.44
MBD1-207ENST00000398488 AFAP1L1Q8TED9 768 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 TRAPPC12Q8WVT3 735 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 ZNF302Q9NR11 478 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.79■□□□□ 0.44
MBD1-207ENST00000398488 ERAP1Q9NZ08 941 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 SAMM50Q9Y512 469 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 MAFBQ9Y5Q3 323 aaPredicted RBP17.79■□□□□ 0.44
MBD1-207ENST00000398488 MROH7Q68CQ1 1323 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 WDR81Q562E7 1941 aa17.79■□□□□ 0.44
MBD1-207ENST00000398488 TREHO43280 583 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 STX6O43752 255 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 STBD1O95210 358 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 PSAPP07602 524 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 PDCP20941 246 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 IL17AQ16552 155 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 PTGISQ16647 500 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 MARCH8Q5T0T0 291 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
MBD1-207ENST00000398488 MIER3Q7Z3K6 550 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 PPP1R12CQ9BZL4 782 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 WRAP73Q9P2S5 460 aaPredicted RBP17.78■□□□□ 0.44
MBD1-207ENST00000398488 ZNF215Q9UL58 517 aaPredicted RBP17.78■□□□□ 0.44
MBD1-207ENST00000398488 NOL7Q9UMY1 257 aaKnown RBP17.78■□□□□ 0.44
MBD1-207ENST00000398488 LTBP2Q14767 1821 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 IGSF9BQ9UPX0 1349 aa17.78■□□□□ 0.44
MBD1-207ENST00000398488 INSRRP14616 1297 aa17.77■□□□□ 0.44
MBD1-207ENST00000398488 CYP2C18P33260 490 aa17.77■□□□□ 0.44
MBD1-207ENST00000398488 FOXD4L5Q5VV16 416 aaPredicted RBP17.77■□□□□ 0.44
MBD1-207ENST00000398488 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
MBD1-207ENST00000398488 LMBR1Q8WVP7 490 aa17.77■□□□□ 0.44
MBD1-207ENST00000398488 FOXD4L4Q8WXT5 416 aaPredicted RBP17.77■□□□□ 0.44
MBD1-207ENST00000398488 NOC4LQ9BVI4 516 aaKnown RBP17.77■□□□□ 0.44
MBD1-207ENST00000398488 SEZ6LQ9BYH1 1024 aa17.77■□□□□ 0.44
MBD1-207ENST00000398488 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.44
MBD1-207ENST00000398488 AZI2Q9H6S1 392 aa17.77■□□□□ 0.44
MBD1-207ENST00000398488 TTC12Q9H892 705 aaPredicted RBP17.77■□□□□ 0.44
MBD1-207ENST00000398488 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 TMEM150BA6NC51 233 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 ZBTB42B2RXF5 422 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 TLR3O15455 904 aaKnown RBP17.77■□□□□ 0.43
MBD1-207ENST00000398488 MARCH6O60337 910 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 HSP90AA1P07900 732 aaKnown RBP17.77■□□□□ 0.43
MBD1-207ENST00000398488 JAK3P52333 1124 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 MDM2Q00987 491 aaPredicted RBP17.77■□□□□ 0.43
MBD1-207ENST00000398488 PTGDRQ13258 359 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.43
MBD1-207ENST00000398488 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 SLFN12Q8IYM2 578 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 BANK1Q8NDB2 785 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 BADQ92934 168 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 RGL1Q9NZL6 768 aa17.77■□□□□ 0.43
MBD1-207ENST00000398488 POTEB3A0JP26 581 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 POTEMA6NI47 508 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 BAG4O95429 457 aaKnown RBP17.76■□□□□ 0.43
MBD1-207ENST00000398488 OR52Z1P0C646 297 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 SFNP31947 248 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 MAGEA10P43363 369 aaPredicted RBP17.76■□□□□ 0.43
MBD1-207ENST00000398488 IGBP1P78318 339 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 PPFIA1Q13136 1202 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 GRIK4Q16099 956 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 RILPL1Q5EBL4 403 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 FAM160B1Q5W0V3 765 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 POTEBQ6S5H4 581 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 WNT8AQ9H1J5 351 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 PCDHA12Q9UN75 941 aa17.76■□□□□ 0.43
MBD1-207ENST00000398488 TIMP1P01033 207 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 TECP42680 631 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 EPHB4P54760 987 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 ORC2Q13416 577 aaPredicted RBP17.75■□□□□ 0.43
MBD1-207ENST00000398488 RDM1Q8NG50 284 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 ATP8B4Q8TF62 1192 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 ATP6V0A1Q93050 837 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 DYDC2Q96IM9 177 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 TCEAL9Q9UHQ7 104 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 TRPC6Q9Y210 931 aa17.75■□□□□ 0.43
MBD1-207ENST00000398488 A0A087WWV3 80 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 ZBTB39O15060 712 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 RAG1P15918 1043 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 CCL23P55773 120 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 CTTNQ14247 550 aaKnown RBP17.74■□□□□ 0.43
MBD1-207ENST00000398488 EPHA7Q15375 998 aa17.74■□□□□ 0.43
MBD1-207ENST00000398488 TRAF7Q6Q0C0 670 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms