RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 REXO1L1PQ8IX06 675 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 C4orf19Q8IY42 314 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 EHBP1Q8NDI1 1231 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 ZSWIM4Q9H7M6 989 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 FBXL5Q9UKA1 691 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 TEX33O43247 280 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 KNOP1Q1ED39 458 aaKnown RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 CDAN1Q8IWY9 1227 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 TRPM4Q8TD43 1214 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 ACAD9Q9H845 621 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 KRT83P78385 493 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 C12orf56Q8IXR9 622 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 OR8K1Q8NGG5 319 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 GLIS2Q9BZE0 524 aaPredicted RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 SLC39A2Q9NP94 309 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 GGA3Q9NZ52 723 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 GTPBP10A4D1E9 387 aaKnown RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 IPO5O00410 1097 aaKnown RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 USP2O75604 605 aaPredicted RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 NF2P35240 595 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 AGBL1Q96MI9 1066 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 C17orf75Q9HAS0 396 aa8.17□□□□□ -1.1
RGPD1-201ENST00000398193 LUC7L2Q9Y383 392 aaKnown RBP8.17□□□□□ -1.1
RGPD1-201ENST00000398193 UQCRHLA0A096LP55 91 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 TRIM49BA6NDI0 452 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 FAM13AO94988 1023 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 UQCRHP07919 91 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 STAT3P40763 770 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 SLC9A9Q8IVB4 645 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 NSUN6Q8TEA1 469 aaKnown RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 DYDC2Q96IM9 177 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 L2HGDHQ9H9P8 463 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 A0A0G2JLL6 359 aaPredicted RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 H0YCG3 227 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 LCA5LO95447 670 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 RTP1P59025 263 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 PPIL2Q13356 520 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 ARHGEF16Q5VV41 709 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 RINT1Q6NUQ1 792 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 PRRT2Q7Z6L0 340 aaPredicted RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 RIOX2Q8IUF8 465 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 REEP2Q9BRK0 252 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 STRA6Q9BX79 667 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 NDST4Q9H3R1 872 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 TMEM206Q9H813 350 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 TBC1D7Q9P0N9 293 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 KCNH4Q9UQ05 1017 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 PCDHB13Q9Y5F0 798 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 POTEFA5A3E0 1075 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 CETN3O15182 167 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 MTMR1Q13613 665 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 DYMQ7RTS9 669 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 SCFD1Q8WVM8 642 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 RAVER2Q9HCJ3 691 aaKnown RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 CEP72Q9P209 647 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 SIK3Q9Y2K2 1263 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 DHX15O43143 795 aaKnown RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 SLC25A27O95847 323 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 RFX1P22670 979 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 CASP14P31944 242 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 CYLC1P35663 651 aaPredicted RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 MAPK8IP2Q13387 824 aaPredicted RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 VPS16Q9H269 839 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 PARVGQ9HBI0 331 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 KCNH7Q9NS40 1196 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 DNAI1Q9UI46 699 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 WDR64B1ANS9 1081 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 PSMC5P62195 406 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 ETF1P62495 437 aaKnown RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 TBC1D8BQ0IIM8 1120 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 HERC4Q5GLZ8 1057 aaPredicted RBP8.16□□□□□ -1.1
RGPD1-201ENST00000398193 RNF146Q9NTX7 359 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 USP20Q9Y2K6 914 aa8.16□□□□□ -1.1
RGPD1-201ENST00000398193 COL11A1P12107 1806 aaPredicted RBP8.15□□□□□ -1.1
RGPD1-201ENST00000398193 PMM2O15305 246 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 ALAS1P13196 640 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 GNPTABQ3T906 1256 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 KCNV1Q6PIU1 500 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 CALR3Q96L12 384 aaKnown RBP8.15□□□□□ -1.1
RGPD1-201ENST00000398193 PDCD2LQ9BRP1 358 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 CSADQ9Y600 493 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 SNCAIPQ9Y6H5 919 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 SIP14410 1827 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 PTPRFP10586 1907 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 PPP1R12BO60237 982 aaPredicted RBP8.15□□□□□ -1.1
RGPD1-201ENST00000398193 IDEP14735 1019 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 QARSP47897 775 aaKnown RBP8.15□□□□□ -1.1
RGPD1-201ENST00000398193 VSIG10LQ86VR7 867 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 PLCB1Q9NQ66 1216 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 PPP1R1BQ9UD71 204 aaPredicted RBP8.15□□□□□ -1.1
RGPD1-201ENST00000398193 ADGRG1Q9Y653 693 aa8.15□□□□□ -1.1
RGPD1-201ENST00000398193 EIF3CLB5ME19 914 aaKnown RBP8.15□□□□□ -1.11
RGPD1-201ENST00000398193 EML1O00423 815 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms