RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ZNF711Q9Y462 761 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 TAF6LQ9Y6J9 622 aa7.2□□□□□ -1.26
TM9SF4-202ENST00000398022 A0A087WZG4 1122 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 A0A1W2PQ27 194 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 A0A1W2PQ64 194 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 A0A1W2PQD8 194 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TSPY2A6NKD2 308 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 AGR2O95994 175 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TSPY3P0CV98 308 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TSPY8P0CW00 308 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 SCG2P13521 617 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP6V1E1P36543 226 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 EPS15P42566 896 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TSPY1Q01534 308 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 SEMA3AQ14563 771 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 ADALQ6DHV7 355 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 POTEEQ6S8J3 1075 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 INTS8Q75QN2 995 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 HOMER1Q86YM7 354 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 CCAR2Q8N163 923 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 ACBD3Q9H3P7 528 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PAG1Q9NWQ8 432 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TMEM232C9JQI7 657 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 M0R2C6 588 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 AHCYL1O43865 530 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TADA3O75528 432 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 S100A6P06703 90 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC3A2P08195 630 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PTPN12Q05209 780 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PGBD3Q8N328 593 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 CARNMT1Q8N4J0 409 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 NIFKQ9BYG3 293 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF700Q9H0M5 742 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 LAMP5Q9UJQ1 280 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PNMA8BQ9ULN7 279 aaPredicted RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 TACC3Q9Y6A5 838 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC4A4Q9Y6R1 1079 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PRAMEF22A3QJZ6 481 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PCNAP12004 261 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 PLIN5Q00G26 463 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 MAP7Q14244 749 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 LRRC31Q6UY01 552 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 BRAPQ7Z569 592 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 RALYLQ86SE5 291 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 NLRP14Q86W24 1093 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 CCDC116Q8IYX3 515 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 AADATQ8N5Z0 425 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 SPDYE1Q8NFV5 336 aaPredicted RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 NLGN2Q8NFZ4 835 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 NUP133Q8WUM0 1156 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 CCSER2Q9H7U1 834 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 FAM53CQ9NYF3 392 aa7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF215Q9UL58 517 aaPredicted RBP7.19□□□□□ -1.26
TM9SF4-202ENST00000398022 SOWAHDA6NJG2 315 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SPDYE3A6NKU9 549 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 ZBTB39O15060 712 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 YEATS4O95619 227 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 GJA9P57773 515 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 BASP1P80723 227 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SLFNL1Q499Z3 407 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 TRIM68Q6AZZ1 485 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 METTL16Q86W50 562 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 STON2Q8WXE9 905 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC52A2Q9HAB3 445 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PARVGQ9HBI0 331 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 STARD7Q9NQZ5 370 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 FKBP14Q9NWM8 211 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 RTEL1Q9NZ71 1219 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 IL1RAPL1Q9NZN1 696 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 TIMM22Q9Y584 194 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PCDHGC5Q9Y5F6 944 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF609O15014 1411 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 KDM6AO15550 1401 aaPredicted RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 ZBTB7AO95365 584 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 ABL1P00519 1130 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 IFIT1P09914 478 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 IL15P40933 162 aaPredicted RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 RAC1P63000 192 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 FOXK1P85037 733 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 DR1Q01658 176 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC39A6Q13433 755 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 LAMC2Q13753 1193 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PNMA8AQ86V59 439 aaPredicted RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 DDX42Q86XP3 938 aaKnown RBP eCLIP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 THAP11Q96EK4 314 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SEC62Q99442 399 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 KCTD10Q9H3F6 313 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 EPS15L1Q9UBC2 864 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 KCPQ6ZWJ8 1503 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 TARSL2A2RTX5 802 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 LDHBP07195 334 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 MTHFD1P11586 935 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC5A1P13866 664 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 CTNNA1P35221 906 aaKnown RBP7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 SCNN1BP51168 640 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 CYP4A11Q02928 519 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 FAPQ12884 760 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 EPHA10Q5JZY3 1008 aa7.18□□□□□ -1.26
TM9SF4-202ENST00000398022 PRPF38BQ5VTL8 546 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms