RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MSH4O15457 936 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 RPL13P26373 211 aaKnown RBP11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 GUCY2DQ02846 1103 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 DCAF4Q8WV16 495 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 GLT8D2Q9H1C3 349 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 JRKLQ9Y4A0 524 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 LRP5O75197 1615 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 JAG1P78504 1218 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 PSMD2Q13200 908 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 DNAJC19Q96DA6 116 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 OSBPL9Q96SU4 736 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 NAP1L4Q99733 375 aaKnown RBP11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM204AQ9H8W3 233 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 CCPG1Q9ULG6 757 aa11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 DDX60Q8IY21 1712 aaKnown RBP11.46□□□□□ -0.58
CPSF1P1-201ENST00000397477 LRRIQ3A6PVS8 624 aaPredicted RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 EML1O00423 815 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 USP14P54578 494 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 HNRNPH2P55795 449 aaKnown RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 DGKZQ13574 1117 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 TRAPPC11Q7Z392 1133 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 TXLNBQ8N3L3 684 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 CCDC169A6NNP5 214 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 MEIS2O14770 477 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 SMARCA1P28370 1054 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 SF3A3Q12874 501 aaKnown RBP eCLIP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 DACT2Q5SW24 774 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 PRAMEF18Q5VWM3 479 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 GLIS2Q9BZE0 524 aaPredicted RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 CHORDC1Q9UHD1 332 aaPredicted RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 A0A087X0T9 212 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 TESPA1A2RU30 521 aaPredicted RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA6BA6NDN3 693 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 PSMD14O00487 310 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 AFPP02771 609 aaKnown RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 NR3C1P04150 777 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM228BP0C875 321 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 KLRC1P26715 233 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 KNOP1Q1ED39 458 aaKnown RBP11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZFYVE27Q5T4F4 411 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 ELMO3Q96BJ8 720 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 CCDC127Q96BQ5 260 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 FRMD4BQ9Y2L6 1034 aa11.45□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA8IPA6NC78 632 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA8JA6NMD2 632 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZEB2O60315 1214 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 RNF40O75150 1001 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 MCM3P25205 808 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 USP11P51784 963 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 TNIP1Q15025 636 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZSCAN26Q16670 478 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 LRRC55Q6ZSA7 311 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SH2D4AQ9H788 454 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 STK32BQ9NY57 414 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 DMGDHQ9UI17 866 aaKnown RBP11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SIK3Q9Y2K2 1263 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 K7ENM7 598 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 RGL2O15211 777 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 NT5C2P49902 561 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 COG2Q14746 738 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM186BQ8IYM0 893 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 AGBL1Q96MI9 1066 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 EPB41L5Q9HCM4 733 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 CALCOCO1Q9P1Z2 691 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SNX12Q9UMY4 172 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZBTB22O15209 634 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 FOSP01100 380 aaPredicted RBP11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SERPING1P05155 500 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 KCNMA1Q12791 1236 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 RPS6KA1Q15418 735 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 TMEM119Q4V9L6 283 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 GBP6Q6ZN66 633 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SPATA4Q8NEY3 305 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 SELENOOQ9BVL4 669 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 TIAM2Q8IVF5 1701 aa11.44□□□□□ -0.58
CPSF1P1-201ENST00000397477 FLOT1O75955 427 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 GNA14O95837 355 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 ATP1A2P50993 1020 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 GIT2Q14161 759 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms