RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SV2BQ7L1I2 683 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 DHX37Q8IY37 1157 aaKnown RBP23.69■■□□□ 1.38
CPNE1-204ENST00000397443 GIMAP8Q8ND71 665 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-204ENST00000397443 DNM3Q9UQ16 869 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 BACH1O14867 736 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 P4HBP07237 508 aaKnown RBP23.69■■□□□ 1.38
CPNE1-204ENST00000397443 SWSAP1Q6NVH7 229 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 SMAP1Q8IYB5 467 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-204ENST00000397443 KBTBD4Q9NVX7 518 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 GABBR1Q9UBS5 961 aa23.69■■□□□ 1.38
CPNE1-204ENST00000397443 PLA2G4BP0C869 781 aa23.68■■□□□ 1.38
CPNE1-204ENST00000397443 CELF3Q5SZQ8 465 aaKnown RBP23.68■■□□□ 1.38
CPNE1-204ENST00000397443 METTL7BQ6UX53 244 aa23.68■■□□□ 1.38
CPNE1-204ENST00000397443 MSL3Q8N5Y2 521 aaKnown RBP23.68■■□□□ 1.38
CPNE1-204ENST00000397443 BEGAINQ9BUH8 593 aa23.68■■□□□ 1.38
CPNE1-204ENST00000397443 PSAPP07602 524 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 QARSP47897 775 aaKnown RBP23.67■■□□□ 1.38
CPNE1-204ENST00000397443 TYRO3Q06418 890 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 CCDC144BQ3MJ40 725 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 HSDL1Q3SXM5 330 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 OLFML2BQ68BL8 750 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 MIS18BP1Q6P0N0 1132 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 ZNF296Q8WUU4 475 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-204ENST00000397443 SMARCE1Q969G3 411 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 SPATA33Q96N06 139 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 BHMT2Q9H2M3 363 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 NOP56O00567 594 aaKnown RBP23.67■■□□□ 1.38
CPNE1-204ENST00000397443 SLC26A4O43511 780 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 GTPBP6O43824 516 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-204ENST00000397443 DPYDQ12882 1025 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 ABHD15Q6UXT9 468 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 DYMQ7RTS9 669 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 CCDC60Q8IWA6 550 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-204ENST00000397443 ELOA2Q8IYF1 753 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-204ENST00000397443 NEK9Q8TD19 979 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 ZSWIM4Q9H7M6 989 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 MAGEF1Q9HAY2 307 aa23.67■■□□□ 1.38
CPNE1-204ENST00000397443 CCDC192P0DO97 292 aa23.66■■□□□ 1.38
CPNE1-204ENST00000397443 RAD51AP2Q09MP3 1159 aa23.66■■□□□ 1.38
CPNE1-204ENST00000397443 GAS2L3Q86XJ1 694 aa23.66■■□□□ 1.38
CPNE1-204ENST00000397443 RDM1Q8NG50 284 aa23.66■■□□□ 1.38
CPNE1-204ENST00000397443 TRIB2Q92519 343 aa23.66■■□□□ 1.38
CPNE1-204ENST00000397443 SH2D3AQ9BRG2 576 aa23.66■■□□□ 1.38
CPNE1-204ENST00000397443 TMEM150BA6NC51 233 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 SUPT20HL2P0C7V6 817 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 SMPD1P17405 629 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 PSMC5P62195 406 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 MAP2K1Q02750 393 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-204ENST00000397443 GPBP1Q86WP2 473 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 NACC1Q96RE7 527 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 TSPY26PQ9H489 355 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 SAGE1Q9NXZ1 904 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 GSTTP1A0A1W2PQM5 241 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 RBM47A0AV96 593 aaKnown RBP23.65■■□□□ 1.38
CPNE1-204ENST00000397443 MYMKA6NI61 221 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 FKTNO75072 461 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 SMC2O95347 1197 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 TCF7P36402 384 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-204ENST00000397443 AMPD3Q01432 767 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 UTP14CQ5TAP6 766 aaKnown RBP23.65■■□□□ 1.38
CPNE1-204ENST00000397443 LENG1Q96BZ8 264 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-204ENST00000397443 FUCA2Q9BTY2 467 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 TRIM9Q9C026 710 aa23.65■■□□□ 1.38
CPNE1-204ENST00000397443 WDR81Q562E7 1941 aa23.64■■□□□ 1.38
CPNE1-204ENST00000397443 NPHP3-ACAD11A0A0J9YXS1 232 aa23.64■■□□□ 1.37
CPNE1-204ENST00000397443 ADCY6O43306 1168 aa23.64■■□□□ 1.37
CPNE1-204ENST00000397443 XRCC5P13010 732 aaKnown RBP23.64■■□□□ 1.37
CPNE1-204ENST00000397443 ASIC1P78348 528 aa23.64■■□□□ 1.37
CPNE1-204ENST00000397443 CACNB1Q02641 598 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-204ENST00000397443 TUBE1Q9UJT0 475 aa23.64■■□□□ 1.37
CPNE1-204ENST00000397443 EYA4O95677 639 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 GH1P01241 217 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ELNP15502 786 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 SLC12A3P55017 1021 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 TNFAIP2Q03169 654 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ARHGAP1Q07960 439 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 DDX12PQ92771 950 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 GPR20Q99678 358 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ZNF302Q9NR11 478 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 SRRDQ9UH36 339 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 MAN1B1Q9UKM7 699 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ZNF862O60290 1169 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ZNF865P0CJ78 1059 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-204ENST00000397443 TRIM32Q13049 653 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 SEPT1Q8WYJ6 367 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ATP6V0A1Q93050 837 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 ERO1AQ96HE7 468 aa23.63■■□□□ 1.37
CPNE1-204ENST00000397443 MYH9P35579 1960 aaKnown RBP23.62■■□□□ 1.37
CPNE1-204ENST00000397443 ATG7O95352 703 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 RPN1P04843 607 aaKnown RBP23.62■■□□□ 1.37
CPNE1-204ENST00000397443 KRT18P05783 430 aaKnown RBP23.62■■□□□ 1.37
CPNE1-204ENST00000397443 HOXD10P28358 340 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 YWHABP31946 246 aaKnown RBP23.62■■□□□ 1.37
CPNE1-204ENST00000397443 GSE1Q14687 1217 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 DUSP28Q4G0W2 176 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 MFSD14CQ5VZR4 134 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 PLA2G4FQ68DD2 849 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 IQSEC1Q6DN90 963 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 TRIM50Q86XT4 487 aa23.62■■□□□ 1.37
CPNE1-204ENST00000397443 SYT2Q8N9I0 419 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms