RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CAP1Q01518 475 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 SP4Q02446 784 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 CYP4A11Q02928 519 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 LONRF3Q496Y0 759 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 FAM160B1Q5W0V3 765 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 TPH2Q8IWU9 490 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 NACC1Q96RE7 527 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 KIAA1024Q9UPX6 916 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 TRIM17Q9Y577 477 aa26.37■■□□□ 1.81
TSPAN4-202ENST00000397396 SMPD1P17405 629 aa26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 ARHGAP1Q07960 439 aa26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 C4orf19Q8IY42 314 aa26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 PPTC7Q8NI37 304 aa26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 LARP4BQ92615 738 aaKnown RBP26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 RGL1Q9NZL6 768 aa26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 TMEM63CQ9P1W3 806 aa26.36■■□□□ 1.81
TSPAN4-202ENST00000397396 BACH1O14867 736 aa26.35■■□□□ 1.81
TSPAN4-202ENST00000397396 PDXDC2PQ6P474 469 aa26.35■■□□□ 1.81
TSPAN4-202ENST00000397396 RAD54LQ92698 747 aa26.35■■□□□ 1.81
TSPAN4-202ENST00000397396 GPR20Q99678 358 aa26.35■■□□□ 1.81
TSPAN4-202ENST00000397396 AZI2Q9H6S1 392 aa26.35■■□□□ 1.81
TSPAN4-202ENST00000397396 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 POTEFA5A3E0 1075 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 XRCC6P12956 609 aaKnown RBP eCLIP26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 CTTNQ14247 550 aaKnown RBP26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 NAALADL2Q58DX5 795 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 BRDTQ58F21 947 aaPredicted RBP26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 PRAMEF19Q5SWL8 479 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 POTEGQ6S5H5 508 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 SV2BQ7L1I2 683 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 BANK1Q8NDB2 785 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 OR6J1Q8NGC5 347 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 PLIN2Q99541 437 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 ZNF302Q9NR11 478 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 GABBR1Q9UBS5 961 aa26.34■■□□□ 1.81
TSPAN4-202ENST00000397396 EMSYQ7Z589 1322 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 IGSF9BQ9UPX0 1349 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 IGKV6D-21A0A0A0MT36 114 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 SEPT4O43236 478 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 TCF7P36402 384 aaPredicted RBP26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 SLC26A2P50443 739 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 ECM1Q16610 540 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 AFAP1L1Q8TED9 768 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 COPS5Q92905 334 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 AP5M1Q9H0R1 490 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 KBTBD4Q9NVX7 518 aa26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 GNEQ9Y223 722 aaKnown RBP26.33■■□□□ 1.81
TSPAN4-202ENST00000397396 GSTTP1A0A1W2PQM5 241 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 SORBS3O60504 671 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 EYA4O95677 639 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 PRKAR2AP13861 404 aaKnown RBP26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 ELNP15502 786 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 CACNB2Q08289 660 aaPredicted RBP26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 POSTNQ15063 836 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 HSDL1Q3SXM5 330 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 SWSAP1Q6NVH7 229 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 TLK2Q86UE8 772 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 BCAS3Q9H6U6 928 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 BLOC1S4Q9NUP1 217 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 LOXHD1Q8IVV2 1947 aa26.32■■□□□ 1.8
TSPAN4-202ENST00000397396 DUSP11O75319 330 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 LGR5O75473 907 aa26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 GRK4P32298 578 aa26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 OTUD6AQ7L8S5 288 aa26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 SH3RF1Q7Z6J0 888 aa26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 CCDC60Q8IWA6 550 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 PAGE5Q96GU1 130 aa26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 FAM167AQ96KS9 214 aa26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 CCDC43Q96MW1 224 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 DBR1Q9UK59 544 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 MAFBQ9Y5Q3 323 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-202ENST00000397396 DOCK5Q9H7D0 1870 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 PCNTO95613 3336 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 GTPBP6O43824 516 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 SMC2O95347 1197 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 PLA2G4BP0C869 781 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 CPT1AP50416 773 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 STAT5BP51692 787 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 CAMK4Q16566 473 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 MAP3K21Q5TCX8 1036 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 RBM43Q6ZSC3 357 aaKnown RBP26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 PLPPR4Q7Z2D5 763 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 SMARCAD1Q9H4L7 1026 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 SPC25Q9HBM1 224 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 BMP2KQ9NSY1 1161 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 ANKEF1Q9NU02 776 aa26.3■■□□□ 1.8
TSPAN4-202ENST00000397396 E9PMD0 336 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 MSCO60682 206 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 PPFIA4O75335 1185 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 RARBP10826 455 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 HOXD8P13378 290 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 CNGA1P29973 690 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 CTCFP49711 727 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 XKR3Q5GH77 459 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 SYT2Q8N9I0 419 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 TRPV1Q8NER1 839 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 KCND2Q9NZV8 630 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 PTCH2Q9Y6C5 1203 aa26.29■■□□□ 1.8
TSPAN4-202ENST00000397396 DYNC1LI2O43237 492 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-202ENST00000397396 HSPA8P11142 646 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms