RNA–Protein interactions for RNA: ENST00000397176.6

PRKCQ-202, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-202ENST00000397176 PDE6CP51160 858 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 SLC29A2Q14542 456 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 TMTC2Q8N394 836 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 SCFD2Q8WU76 684 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 CENPTQ96BT3 561 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 PBKQ96KB5 322 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 ZMYND12Q9H0C1 365 aa12.34□□□□□ -0.43
PRKCQ-202ENST00000397176 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.43
PRKCQ-202ENST00000397176 GBP1P32455 592 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 IGHMBP2P38935 993 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 BNIP1Q12981 228 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 MTHFD1LQ6UB35 978 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 TEX9Q8N6V9 391 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 SDR42E1Q8WUS8 393 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 UCMAQ8WVF2 138 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 GPKOWQ92917 476 aaPredicted RBP eCLIP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 TMEM237Q96Q45 408 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 LSM14BQ9BX40 385 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 TMX4Q9H1E5 349 aaPredicted RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 IQSEC3Q9UPP2 1182 aaPredicted RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 ZNF131P52739 623 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 MRPS35P82673 323 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 LRRC41Q15345 812 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 MAN2A1Q16706 1144 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 HHATQ5VTY9 493 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 RMDN2Q96LZ7 410 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 ARHGEF3Q9NR81 526 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 PCMTD2Q9NV79 361 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 CHCHD3Q9NX63 227 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 SNX24Q9Y343 169 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 NR2E1Q9Y466 385 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 MYH1P12882 1939 aa12.33□□□□□ -0.44
PRKCQ-202ENST00000397176 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 KLC1Q07866 573 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 ENAHQ8N8S7 591 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 KIAA0895Q8NCT3 520 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 PHC3Q8NDX5 983 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 FAM81AQ8TBF8 368 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 GLG1Q92896 1179 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 RBM41Q96IZ5 413 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 TRIM9Q9C026 710 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 SSU72P8A0A1W2PR75 194 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 FGFR4P22455 802 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 PMS2P54278 862 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 NUDCD1Q96RS6 583 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 ADAMTS13Q76LX8 1427 aa12.32□□□□□ -0.44
PRKCQ-202ENST00000397176 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 CCDC169A6NNP5 214 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 SERPING1P05155 500 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 CREB1P16220 341 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 EIF3BP55884 814 aaKnown RBP12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 FUT2Q10981 343 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 ABCC12Q96J65 1359 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 FGGP02679 453 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 KCNMA1Q12791 1236 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 SLC18A3Q16572 532 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 INF2Q27J81 1249 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 CCDC25Q86WR0 208 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 SYCP3Q8IZU3 236 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 FGD4Q96M96 766 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 CNGA1P29973 690 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 USP11P51784 963 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 GALNTL6Q49A17 601 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
PRKCQ-202ENST00000397176 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms