RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-205ENST00000397017 EML1O00423 815 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 LIG4P49917 911 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 MRPS25P82663 173 aaKnown RBP16.69■□□□□ 0.26
MCF2L-205ENST00000397017 TXLNBQ8N3L3 684 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 GIMAP8Q8ND71 665 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-205ENST00000397017 CTNNBL1Q8WYA6 563 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-205ENST00000397017 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 KMT5AQ9NQR1 393 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 NUP188Q5SRE5 1749 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 PGK2P07205 417 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-205ENST00000397017 TATDN1Q6P1N9 297 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
MCF2L-205ENST00000397017 RUSC1Q9BVN2 902 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 KBTBD4Q9NVX7 518 aa16.69■□□□□ 0.26
MCF2L-205ENST00000397017 PVALEFA0A1B0GWK0 134 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 KRT19P08727 400 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 CXCR5P32302 372 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 MDM2Q00987 491 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-205ENST00000397017 HLTFQ14527 1009 aaKnown RBP eCLIP16.68■□□□□ 0.26
MCF2L-205ENST00000397017 GMCL1P1Q8NEA9 526 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 HAS1Q92839 578 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 MTRQ99707 1265 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 QARSP47897 775 aaKnown RBP16.68■□□□□ 0.26
MCF2L-205ENST00000397017 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
MCF2L-205ENST00000397017 KIAA1755Q5JYT7 1200 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 ATP6V0A1Q93050 837 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 EIF4A3P38919 411 aaKnown RBP16.68■□□□□ 0.26
MCF2L-205ENST00000397017 SOX10P56693 466 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 PHLDB2Q86SQ0 1253 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 SAAL1Q96ER3 474 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-205ENST00000397017 C7orf25Q9BPX7 421 aa16.68■□□□□ 0.26
MCF2L-205ENST00000397017 HIP1RO75146 1068 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 TNFAIP3P21580 790 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 SLC7A3Q8WY07 619 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 CYP11B2P19099 503 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 E2F4Q16254 413 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 ZBTB33Q86T24 672 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 GUF1Q8N442 669 aaKnown RBP16.67■□□□□ 0.26
MCF2L-205ENST00000397017 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
MCF2L-205ENST00000397017 INO80BQ9C086 356 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-205ENST00000397017 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 USP20Q9Y2K6 914 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 GFPT2O94808 682 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 NR3C1P04150 777 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 ICAM1P05362 532 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 CNGA1P29973 690 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 KCNH2Q12809 1159 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 GBP6Q6ZN66 633 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 UNC45AQ9H3U1 944 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 ABHD10Q9NUJ1 306 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 BLOC1S4Q9NUP1 217 aa16.67■□□□□ 0.26
MCF2L-205ENST00000397017 WDR64B1ANS9 1081 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 GCLMP48507 274 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 KCNB1Q14721 858 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 NR1I3Q14994 352 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 STXBP2Q15833 593 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 KIAA0753Q2KHM9 967 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
MCF2L-205ENST00000397017 C7orf43Q8WVR3 580 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 MKL1Q969V6 931 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 NLRP4Q96MN2 994 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 ACTN1P12814 892 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 SREBF1P36956 1147 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 LRRC63Q05C16 580 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 LMBRD2Q68DH5 695 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-205ENST00000397017 IL31RAQ8NI17 732 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 MXRA8Q9BRK3 442 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 SPEF2Q9C093 1822 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 A0A1B0GTH6 734 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 P4HBP07237 508 aaKnown RBP16.66■□□□□ 0.26
MCF2L-205ENST00000397017 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-205ENST00000397017 ECM1Q16610 540 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 KNOP1Q1ED39 458 aaKnown RBP16.66■□□□□ 0.26
MCF2L-205ENST00000397017 ADAT2Q7Z6V5 191 aaKnown RBP16.66■□□□□ 0.26
MCF2L-205ENST00000397017 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 MRIQ9BWK5 157 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 IMPG2Q9BZV3 1241 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 STK24Q9Y6E0 443 aa16.66■□□□□ 0.26
MCF2L-205ENST00000397017 RPA1P27694 616 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 SARSP49591 514 aaKnown RBP16.65■□□□□ 0.26
MCF2L-205ENST00000397017 CDR1P51861 262 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 APBA1Q02410 837 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 CCDC125Q86Z20 511 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms