RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 FAM43BQ6ZT52 329 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF572Q7Z3I7 529 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 TBCKQ8TEA7 893 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 LRRC45Q96CN5 670 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 SPAG5Q96R06 1193 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 ELAC2Q9BQ52 826 aaKnown RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 NUDT12Q9BQG2 462 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 DCP1AQ9NPI6 582 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 ANAPC4Q9UJX5 808 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 GNPATO15228 680 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 CYTH3O43739 400 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 SERPING1P05155 500 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 POLD1P28340 1107 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 ASIC2Q16515 512 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC152Q4G0S7 254 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 MEI1Q5TIA1 1274 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 SPTY2D1Q68D10 685 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 NAIF1Q69YI7 327 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 CENPPQ6IPU0 288 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 YTHDF3Q7Z739 585 aaKnown RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 DAAM2Q86T65 1068 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 MGARPQ8TDB4 240 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 DDX12PQ92771 950 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 STAMBPL1Q96FJ0 436 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 INPP4AQ96PE3 977 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 C7orf25Q9BPX7 421 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 ACTR5Q9H9F9 607 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 COL11A2P13942 1736 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-203ENST00000396547 FGFR1OPO95684 399 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 TSPY3P0CV98 308 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 TSPY8P0CW00 308 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 KLRK1P26718 216 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 PRDX5P30044 214 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 HNRNPH3P31942 346 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 HSPA9P38646 679 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 MECOMQ03112 1051 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 NONOQ15233 471 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 LLGL1Q15334 1064 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 TCERG1LQ5VWI1 586 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 RCSD1Q6JBY9 416 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 SNX29Q8TEQ0 813 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF384Q8TF68 577 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF622Q969S3 477 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 NLRP3Q96P20 1036 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 CRNKL1Q9BZJ0 848 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 PDGFDQ9GZP0 370 aaPredicted RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ISCUQ9H1K1 167 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 PLCB1Q9NQ66 1216 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 PJA2O43164 708 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 KIF1CO43896 1103 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 KSR1Q8IVT5 923 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 MMTAG2Q9BU76 263 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 STK38LQ9Y2H1 464 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 FLT1P17948 1338 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 NPHP3-ACAD11A0A0J9YXS1 232 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 A0A1B0GUA9 196 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 KLRF2D3W0D1 207 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 CAND2O75155 1236 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 TNFRSF8P28908 595 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 SLC35G1Q2M3R5 365 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ASTE1Q2TB18 679 aaPredicted RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC38Q502W7 563 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 LRCH2Q5VUJ6 765 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 PEX26Q7Z412 305 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 KCNK18Q7Z418 384 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF444Q8N0Y2 327 aaPredicted RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC63Q8NA47 563 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 RUBCNQ92622 972 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ANKS1AQ92625 1134 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 NOD2Q9HC29 1040 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
TRIM39-203ENST00000396547 ATP6V0A2Q9Y487 856 aa10.75□□□□□ -0.69
TRIM39-203ENST00000396547 KIF4AO95239 1232 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 KRT18P05783 430 aaKnown RBP10.74□□□□□ -0.69
TRIM39-203ENST00000396547 TGFB2P61812 414 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 SLC18A3Q16572 532 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 CD302Q8IX05 232 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 METTL13Q8N6R0 699 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 FGFBP2Q9BYJ0 223 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 MLXIPLQ9NP71 852 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 A1CFQ9NQ94 594 aaKnown RBP10.74□□□□□ -0.69
TRIM39-203ENST00000396547 IL17RBQ9NRM6 502 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 RNF14Q9UBS8 474 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 SLC12A6Q9UHW9 1150 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 NOC2LQ9Y3T9 749 aaKnown RBP10.74□□□□□ -0.69
TRIM39-203ENST00000396547 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 STXBP3O00186 592 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 NOL4O94818 638 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 CAMTA2O94983 1202 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 UPP2O95045 317 aa10.74□□□□□ -0.69
TRIM39-203ENST00000396547 MYL1P05976 194 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms