RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 EFCAB8A8MWE9 144 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 VCAM1P19320 739 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 CARD6Q9BX69 1037 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 OLFML3Q9NRN5 406 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 TYW1Q9NV66 732 aaKnown RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 SAMM50Q9Y512 469 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 C19orf81C9J6K1 198 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 EGFRP00533 1210 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 ARP10275 920 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 MARSP56192 900 aaKnown RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 BACE1P56817 501 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 SUPT20HL1Q3ZLR7 823 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 NHEJ1Q9H9Q4 299 aaPredicted RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 TBC1D22BQ9NU19 505 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 PLAGL2Q9UPG8 496 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 TRAF3IP3Q9Y228 551 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 EIF3CLB5ME19 914 aaKnown RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 EPB41P11171 864 aaKnown RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 CCDC122Q5T0U0 273 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 HS2ST1Q7LGA3 356 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 EIF3CQ99613 913 aaKnown RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 NAPGQ99747 312 aaPredicted RBP17.8■□□□□ 0.44
SNX6-202ENST00000396526 TSGA10Q9BZW7 698 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 KCTD10Q9H3F6 313 aa17.8■□□□□ 0.44
SNX6-202ENST00000396526 NFIBO00712 420 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 AKR1B10O60218 316 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 KIF5AQ12840 1032 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 PCNX4Q63HM2 1172 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 FRMD5Q7Z6J6 570 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 CEP112Q8N8E3 955 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 ZSWIM4Q9H7M6 989 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 TMOD4Q9NZQ9 345 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNX6-202ENST00000396526 ODF2LQ9ULJ1 636 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 GUCA1BQ9UMX6 200 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 SIK3Q9Y2K2 1263 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 PPP2R3BQ9Y5P8 575 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 V9GYY5 206 aaPredicted RBP17.79■□□□□ 0.44
SNX6-202ENST00000396526 ZNF536O15090 1300 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 P4HBP07237 508 aaKnown RBP17.79■□□□□ 0.44
SNX6-202ENST00000396526 NSMFQ6X4W1 530 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 RNF207Q6ZRF8 634 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 RRAGAQ7L523 313 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 KCNH7Q9NS40 1196 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 PCDHB13Q9Y5F0 798 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 ELF2Q15723 593 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 ANGEL2Q5VTE6 544 aaKnown RBP17.79■□□□□ 0.44
SNX6-202ENST00000396526 TRERF1Q96PN7 1200 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 UNC45AQ9H3U1 944 aa17.79■□□□□ 0.44
SNX6-202ENST00000396526 EIF3DO15371 548 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNX6-202ENST00000396526 PRPF6O94906 941 aaKnown RBP17.78■□□□□ 0.44
SNX6-202ENST00000396526 KLK7P49862 253 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 GHRHRQ02643 423 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 TRIM59Q8IWR1 403 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 FAM178BQ8IXR5 827 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 SYTL5Q8TDW5 730 aaPredicted RBP17.78■□□□□ 0.44
SNX6-202ENST00000396526 CLEC4DQ8WXI8 215 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 RUSC1Q9BVN2 902 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 HNRNPH3P31942 346 aaKnown RBP17.78■□□□□ 0.44
SNX6-202ENST00000396526 MTMR1Q13613 665 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 XRRA1Q6P2D8 792 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 WDR59Q6PJI9 974 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 LXNQ9BS40 222 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
SNX6-202ENST00000396526 DDX39AO00148 427 aaKnown RBP17.77■□□□□ 0.44
SNX6-202ENST00000396526 XRCC5P13010 732 aaKnown RBP17.77■□□□□ 0.44
SNX6-202ENST00000396526 BMT2Q1RMZ1 405 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 ARHGEF16Q5VV41 709 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 GOLGA5Q8TBA6 731 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 RMDN3Q96TC7 470 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 CEP72Q9P209 647 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 CDC23Q9UJX2 597 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 ZHX2Q9Y6X8 837 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 ERCC3P19447 782 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 RPS6P62753 249 aaKnown RBP17.77■□□□□ 0.44
SNX6-202ENST00000396526 ERCC6LQ2NKX8 1250 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 ZNF662Q6ZS27 426 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 SLC35F6Q8N357 371 aa17.77■□□□□ 0.44
SNX6-202ENST00000396526 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.44
SNX6-202ENST00000396526 MYCLP12524 364 aaPredicted RBP17.77■□□□□ 0.43
SNX6-202ENST00000396526 TKFCQ3LXA3 575 aa17.77■□□□□ 0.43
SNX6-202ENST00000396526 SLC9C1Q4G0N8 1177 aa17.77■□□□□ 0.43
SNX6-202ENST00000396526 C1orf186Q6ZWK4 172 aa17.77■□□□□ 0.43
SNX6-202ENST00000396526 SMCR8Q8TEV9 937 aaPredicted RBP17.77■□□□□ 0.43
SNX6-202ENST00000396526 ZFP91Q96JP5 570 aaPredicted RBP17.77■□□□□ 0.43
SNX6-202ENST00000396526 PKD2L1Q9P0L9 805 aa17.77■□□□□ 0.43
SNX6-202ENST00000396526 LARSQ9P2J5 1176 aaKnown RBP17.77■□□□□ 0.43
SNX6-202ENST00000396526 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.43
SNX6-202ENST00000396526 RPTORQ8N122 1335 aa17.77■□□□□ 0.43
SNX6-202ENST00000396526 FER1L6Q2WGJ9 1857 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 ITGB5P18084 799 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 NAA30Q147X3 362 aaPredicted RBP17.76■□□□□ 0.43
SNX6-202ENST00000396526 UBIAD1Q9Y5Z9 338 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 UBE4BO95155 1302 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 PTPRAP18433 802 aa17.76■□□□□ 0.43
SNX6-202ENST00000396526 EIF2AK2P19525 551 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms