RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CALM2P0DP24 149 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 CALM3P0DP25 149 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 CHMLP26374 656 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 PTH1RQ03431 593 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 HYAL1Q12794 435 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 MTMR1Q13613 665 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 CASC1Q6TDU7 716 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 CMTR2Q8IYT2 770 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 GSTTP1A0A1W2PQM5 241 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 M0QZ92 97 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 MBTPS2O43462 519 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 IRS1P35568 1242 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 MRPS6P82932 125 aaKnown RBP20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 PKN1Q16512 942 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 HERC4Q5GLZ8 1057 aaPredicted RBP20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 RUFY4Q6ZNE9 571 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 NPAS4Q8IUM7 802 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 MB21D2Q8IYB1 491 aaPredicted RBP20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 DNAJB3Q8WWF6 145 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 MAP4K1Q92918 833 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 TMEM87BQ96K49 555 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 AZI2Q9H6S1 392 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 PLAGL2Q9UPG8 496 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 UBIAD1Q9Y5Z9 338 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 CDY2AQ9Y6F7 541 aa20.08■□□□□ 0.81
EXOSC3-202ENST00000396521 BAZ2BQ9UIF8 2168 aaKnown RBP20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 FSD2A1L4K1 749 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 SGSM2O43147 1006 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 ATP9AO75110 1047 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 GSPT1P15170 499 aaKnown RBP20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 ITGB5P18084 799 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 ADAM15Q13444 863 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 MARCH8Q5T0T0 291 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 NME8Q8N427 588 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 LY9Q9HBG7 655 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 JADE2Q9NQC1 790 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 CD207Q9UJ71 328 aa20.07■□□□□ 0.8
EXOSC3-202ENST00000396521 CCDC69A6NI79 296 aa20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 EYA4O95677 639 aa20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 MCM5P33992 734 aa20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 SLC26A2P50443 739 aa20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 ANTXR2P58335 489 aa20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 ALYREFQ86V81 257 aaKnown RBP20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 JPH1Q9HDC5 661 aaPredicted RBP20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 MYO7AQ13402 2215 aa20.06■□□□□ 0.8
EXOSC3-202ENST00000396521 RALGAPA2Q2PPJ7 1873 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 INSRRP14616 1297 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 MARK3P27448 753 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 LIFRP42702 1097 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 ODR4Q5SWX8 454 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 NFXL1Q6ZNB6 911 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 PLPPR4Q7Z2D5 763 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 CRIPAKQ8N1N5 446 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 TELO2Q9Y4R8 837 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 PCDHA2Q9Y5H9 948 aa20.05■□□□□ 0.8
EXOSC3-202ENST00000396521 KDM3AQ9Y4C1 1321 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 STXBP3O00186 592 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 CD52P31358 61 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 NDUFV1P49821 464 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 BMP8AQ7Z5Y6 402 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 EFHBQ8N7U6 833 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 PRRX2Q99811 253 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 SDF4Q9BRK5 362 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 AGO3Q9H9G7 860 aaKnown RBP20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 SLC9A2Q9UBY0 812 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 TRPV2Q9Y5S1 764 aa20.04■□□□□ 0.8
EXOSC3-202ENST00000396521 TTC3P53804 2025 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 IGSF9BQ9UPX0 1349 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 SMIM35A0A1B0GVV1 85 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 PRC1O43663 620 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 MRE11P49959 708 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 NHLH1Q02575 133 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 UBE3AQ05086 875 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 DLX2Q07687 328 aaPredicted RBP20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 PAK2Q13177 524 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 RNF135Q8IUD6 432 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 SPPL3Q8TCT6 385 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 EDAQ92838 391 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 MSLNLQ96KJ4 702 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 FBXL18Q96ME1 805 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 CELF4Q9BZC1 486 aaKnown RBP20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 IGFLR1Q9H665 355 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 AAASQ9NRG9 546 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 PADI3Q9ULW8 664 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 PCDHA6Q9UN73 950 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 TRPC6Q9Y210 931 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 SUPT16HQ9Y5B9 1047 aaKnown RBP20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 PCDHA8Q9Y5H6 950 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 MRPL42Q9Y6G3 142 aaKnown RBP20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 TAF6LQ9Y6J9 622 aa20.03■□□□□ 0.8
EXOSC3-202ENST00000396521 NFASCO94856 1347 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 KAT6AQ92794 2004 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 TBX10O75333 385 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 FOSP01100 380 aaPredicted RBP20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 SCG2P13521 617 aa20.02■□□□□ 0.8
EXOSC3-202ENST00000396521 IGBP1P78318 339 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms