RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 ADCY7P51828 1080 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 XRCC4Q13426 336 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 TRADDQ15628 312 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 IFI16Q16666 785 aaKnown RBP13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 ZNF571Q7Z3V5 609 aaPredicted RBP13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 TBC1D5Q92609 795 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 EYA3Q99504 573 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 NEUROG2Q9H2A3 272 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 SPATA31A5Q5VU36 1347 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 SPATA31A7Q8IWB4 1347 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 PPP1R11O60927 126 aaPredicted RBP13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 EPHA7Q15375 998 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 ATP8B4Q8TF62 1192 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 TATDN2Q93075 761 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
CTNNB1-203ENST00000396185 FRMPD4Q14CM0 1322 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 GMNCA6NCL1 334 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 TXKP42681 527 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 MMP14P50281 582 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 PTK2Q05397 1052 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 PREPLQ4J6C6 727 aaPredicted RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 CCDC13Q8IYE1 715 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 LDHCP07864 332 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 CYP11B2P19099 503 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 PPATQ06203 517 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 NT5DC3Q86UY8 548 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 POTEMA6NI47 508 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 POLR2FP61218 127 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 GRIK5Q16478 980 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 TMC4Q7Z404 712 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
CTNNB1-203ENST00000396185 SLX4Q8IY92 1834 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 PGRMC1O00264 195 aaKnown RBP13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 FTCDO95954 541 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 ASIC2Q16515 512 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 OTUD6BQ8N6M0 293 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 OSBPL7Q9BZF2 842 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 CNOT10Q9H9A5 744 aaKnown RBP13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.35e-6■□□□□ 9.7
CTNNB1-203ENST00000396185 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 UCHL3P15374 230 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 PLCG2P16885 1265 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 PON1P27169 355 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 RPS6KA1Q15418 735 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 CLUL1Q15846 466 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 CCT6BQ92526 530 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.35e-6■□□□□ 9.1
CTNNB1-203ENST00000396185 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
CTNNB1-203ENST00000396185 GCOM1H8Y6P7 765 aaPredicted RBP13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 PDXKO00764 312 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 TBX3O15119 743 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 MYZAPP0CAP1 466 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 KLHL30Q0D2K2 578 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 PPP2R5EQ16537 467 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 ANKRD20A8PQ5CZ79 823 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 METTL13Q8N6R0 699 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 PGM2Q96G03 612 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 NLRP3Q96P20 1036 aa13.15□□□□□ -0.3
CTNNB1-203ENST00000396185 ZNF317Q96PQ6 595 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms