RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 PRKAG3Q9UGI9 489 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 TELO2Q9Y4R8 837 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 UBIAD1Q9Y5Z9 338 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 CNTNAP5Q8WYK1 1306 aa15.52■□□□□ 0.07
SCAF11-203ENST00000395453 SIP14410 1827 aa15.52■□□□□ 0.07
SCAF11-203ENST00000395453 C17orf102A2RUQ5 167 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 H3BQ06 376 aaPredicted RBP15.51■□□□□ 0.07
SCAF11-203ENST00000395453 MAFGO15525 162 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 ZBTB43O43298 467 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 ATP9AO75110 1047 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 SMIM10L2AP0DMW4 78 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 SMIM10L2BP0DMW5 78 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 KCNA2P16389 499 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 UBE2SQ16763 222 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 TCTN1Q2MV58 587 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 TIGD5Q53EQ6 642 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 WWC2Q6AWC2 1192 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 FAM117BQ6P1L5 589 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 HEATR3Q7Z4Q2 680 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 CDHR1Q96JP9 859 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 C17orf80Q9BSJ5 609 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
SCAF11-203ENST00000395453 PCDHA6Q9UN73 950 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 PCDHA8Q9Y5H6 950 aa15.51■□□□□ 0.07
SCAF11-203ENST00000395453 SPDYE3A6NKU9 549 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 ADAM17P78536 824 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 RTN1Q16799 776 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 TYW1BQ6NUM6 668 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 FBXL16Q8N461 479 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 ATP6V0A1Q93050 837 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 CCDC136Q96JN2 1154 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 MFSD14AQ96MC6 490 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 SAMD11Q96NU1 681 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 RIC8AQ9NPQ8 531 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 V9GY48 417 aaPredicted RBP15.5■□□□□ 0.07
SCAF11-203ENST00000395453 ZNF318Q5VUA4 2279 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 TRIOO75962 3097 aa15.5■□□□□ 0.07
SCAF11-203ENST00000395453 TREHO43280 583 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 CDC27P30260 824 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 HSPA4P34932 840 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 ZP2Q05996 745 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 PPP1R18Q6NYC8 613 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 PABPC5Q96DU9 382 aaKnown RBP15.49■□□□□ 0.07
SCAF11-203ENST00000395453 JADE2Q9NQC1 790 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 SETD4Q9NVD3 440 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 EMSYQ7Z589 1322 aa15.49■□□□□ 0.07
SCAF11-203ENST00000395453 KLF18A0A0U1RQI7 1052 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 GSTTP1A0A1W2PQM5 241 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 RSPH10B2B2RC85 870 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 hCG_1984214I3L0E3 225 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 STXBP3O00186 592 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 CAND2O75155 1236 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 AMHP03971 560 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 RSPH10BP0C881 870 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 GNAT1P11488 350 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 THPOP40225 353 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 MTMR1Q13613 665 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 EPC2Q52LR7 807 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 HFE2Q6ZVN8 426 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 TRIM50Q86XT4 487 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 ADHFE1Q8IWW8 467 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 ZNF713Q8N859 430 aaPredicted RBP15.48■□□□□ 0.07
SCAF11-203ENST00000395453 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 ZNF215Q9UL58 517 aaPredicted RBP15.48■□□□□ 0.07
SCAF11-203ENST00000395453 SNX14Q9Y5W7 946 aa15.48■□□□□ 0.07
SCAF11-203ENST00000395453 KAT6AQ92794 2004 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 TTLL13PA6NNM8 815 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 LGR5O75473 907 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 FOSP01100 380 aaPredicted RBP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 CPA1P15085 419 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 ADD1P35611 737 aaKnown RBP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 TCF7P36402 384 aaPredicted RBP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 CLK2P49760 499 aaKnown RBP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 NAPAP54920 295 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 HTRA4P83105 476 aaPredicted RBP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 PLEKHG4Q58EX7 1191 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 UTP14CQ5TAP6 766 aaKnown RBP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.47■□□□□ 0.07
SCAF11-203ENST00000395453 MYOCDQ8IZQ8 938 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 SEPT1Q8WYJ6 367 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 MXRA8Q9BRK3 442 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 AGXT2Q9BYV1 514 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 EHMT1Q9H9B1 1298 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 NRCAMQ92823 1304 aa15.47■□□□□ 0.07
SCAF11-203ENST00000395453 SMCO2A6NFE2 343 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 H3BNC9 293 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 NCK2O43639 380 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 SP4Q02446 784 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 APOBRQ0VD83 1088 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 COL19A1Q14993 1142 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 TCEAL5Q5H9L2 206 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 FAM26DQ5JW98 314 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 Q6ZUG5 572 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 DBF4BQ8NFT6 615 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 CYP2W1Q8TAV3 490 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 LMBR1Q8WVP7 490 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms