RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 WDR44Q5JSH3 913 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 COX20Q5RI15 118 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 MYO19Q96H55 970 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 PHACTR1Q9C0D0 580 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 PTPRFP10586 1907 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 GOLGA6L4A6NEF3 574 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 SMCHD1A6NHR9 2005 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
RTN1-203ENST00000395090 SNAPC2Q13487 334 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 ZNF174Q15697 407 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 WNK4Q96J92 1243 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 SRPRBQ9Y5M8 271 aaKnown RBP12.94□□□□□ -0.34
RTN1-203ENST00000395090 PARP14Q460N5 1801 aa12.94□□□□□ -0.34
RTN1-203ENST00000395090 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 CMA1P23946 247 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 USP11P51784 963 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 ATP2C1P98194 919 aaPredicted RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 UBE2SQ16763 222 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 P2RX7Q99572 595 aaKnown RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 MAF1Q9H063 256 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 RAVER2Q9HCJ3 691 aaKnown RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 ATP13A2Q9NQ11 1180 aa12.93□□□□□ -0.34
RTN1-203ENST00000395090 MAP3K20Q9NYL2 800 aaKnown RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 FBXO2Q9UK22 296 aaPredicted RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
RTN1-203ENST00000395090 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
RTN1-203ENST00000395090 CUTAO60888 179 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 POLR2MP0CAP2 368 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
RTN1-203ENST00000395090 TXLNAP40222 546 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 HSD17B4P51659 736 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 TMEM132BQ14DG7 1078 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 C1orf53Q5VUE5 145 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
RTN1-203ENST00000395090 PPP4R3AQ6IN85 833 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 GADL1Q6ZQY3 521 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 MCF2L2Q86YR7 1114 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 CPXCR1Q8N123 301 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 LOC285556D6RIA3 1793 aa12.92□□□□□ -0.34
RTN1-203ENST00000395090 CYP3A7-CYP3A51PA0A087WV96 503 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 LAD1O00515 517 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 ZBTB48P10074 688 aaPredicted RBP12.91□□□□□ -0.34
RTN1-203ENST00000395090 CYP3A7P24462 503 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 MCM7P33993 719 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 GTF2A2P52657 109 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 ASCC2Q9H1I8 757 aaPredicted RBP12.91□□□□□ -0.34
RTN1-203ENST00000395090 LRFN2Q9ULH4 789 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 SLC45A1Q9Y2W3 748 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 CTDP1Q9Y5B0 961 aaPredicted RBP12.91□□□□□ -0.34
RTN1-203ENST00000395090 CFBP00751 764 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 CYP3A4P08684 503 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 CETPP11597 493 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 ALAS1P13196 640 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 LIG1P18858 919 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 SREBF1P36956 1147 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 PRPHP41219 470 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 PABPC4Q13310 644 aaKnown RBP eCLIP12.91□□□□□ -0.34
RTN1-203ENST00000395090 SNW1Q13573 536 aaKnown RBP12.91□□□□□ -0.34
RTN1-203ENST00000395090 LETM2Q2VYF4 491 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
RTN1-203ENST00000395090 ENGASEQ8NFI3 743 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 MBOAT7Q96N66 472 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 TRERF1Q96PN7 1200 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 NAP1L4Q99733 375 aaKnown RBP12.91□□□□□ -0.34
RTN1-203ENST00000395090 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 ZDHHC3Q9NYG2 299 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 TMEM63CQ9P1W3 806 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 RIPK3Q9Y572 518 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
RTN1-203ENST00000395090 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 NFIBO00712 420 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
RTN1-203ENST00000395090 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
RTN1-203ENST00000395090 RHOQP17081 205 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
RTN1-203ENST00000395090 CIITAP33076 1130 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 STAT3P40763 770 aa12.9□□□□□ -0.34
RTN1-203ENST00000395090 IL17AQ16552 155 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms