RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 GOLGA6L7A0A1B0GV03 622 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 FRMD3A2A2Y4 597 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 ZNF233A6NK53 670 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM107AO95990 144 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 KRT14P02533 472 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM228BP0C875 321 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 XRCC5P13010 732 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 LIG3P49916 1009 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 EIF3BP55884 814 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 PTGISQ16647 500 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 CROCCP2Q86T23 111 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM133AQ8N9E0 248 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 P3H4Q92791 437 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 KCTD10Q9H3F6 313 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 CPVLQ9H3G5 476 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 PSTPIP2Q9H939 334 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 CD209Q9NNX6 404 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 ADAMTS1Q9UHI8 967 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 HDAC9Q9UKV0 1011 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 PLAAQ9Y263 795 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 GTPBP10A4D1E9 387 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 PDXKO00764 312 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 TRIM37O94972 964 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 FERP16591 822 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 NR2F2P24468 414 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 ATP2B2Q01814 1243 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 EXOC3L4Q17RC7 722 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 CEP85LQ5SZL2 805 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 KCNK18Q7Z418 384 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 CCDC91Q7Z6B0 441 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 TAX1BP1Q86VP1 789 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 CABS1Q96KC9 395 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 EHD2Q9NZN4 543 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 PCDHA2Q9Y5H9 948 aa10.99□□□□□ -0.65
UBE2D3-208ENST00000394803 FRMPD2Q68DX3 1309 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 CYP3A7-CYP3A51PA0A087WV96 503 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 IGKV6D-41A0A0C4DH26 115 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 RAD51CO43502 376 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 CYP3A7P24462 503 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 GUCY2FP51841 1108 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 RHBDL3P58872 404 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 NAA35Q5VZE5 725 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 NLRP14Q86W24 1093 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 ADGRF4Q8IZF3 695 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 PRPF38AQ8NAV1 312 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 ZNF473Q8WTR7 871 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 SCFD1Q8WVM8 642 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 HAS1Q92839 578 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 RNPC3Q96LT9 517 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 RAB17Q9H0T7 212 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 CNOT10Q9H9A5 744 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 JMJD4Q9H9V9 463 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 KIAA1024Q9UPX6 916 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 DNM3Q9UQ16 869 aa10.98□□□□□ -0.65
UBE2D3-208ENST00000394803 GNPATO15228 680 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 CEP104O60308 925 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 H2AFZP0C0S5 128 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 UCHL3P15374 230 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 CYP11B2P19099 503 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 GBP1P32455 592 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 CTNNA1P35221 906 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 ATP1A2P50993 1020 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 ITGB3BPQ13352 177 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 KNOP1Q1ED39 458 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 SKIDA1Q1XH10 827 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 KCTD16Q68DU8 428 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 ALKBH5Q6P6C2 394 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 H2AFVQ71UI9 128 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 PEX26Q7Z412 305 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 NELFCDQ8IXH7 590 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 KLHL7Q8IXQ5 586 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 RASGEF1CQ8N431 466 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 CNBD1Q8NA66 436 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 CCDC17Q96LX7 622 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 NUDT12Q9BQG2 462 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 TYW1Q9NV66 732 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 UTP11Q9Y3A2 253 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 GOLGA6L10A0A0M3HER8 536 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 NKRFO15226 690 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 UFL1O94874 794 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 FOSP01100 380 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 HLA-DOAP06340 250 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM153BP0C7A2 387 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 GAP43P17677 238 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 ARID5AQ03989 594 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 FAM153CQ494X1 144 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 MFSD14BQ5SR56 506 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
UBE2D3-208ENST00000394803 PIK3R5Q8WYR1 880 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms