RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 AKR1B1P15121 316 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 SCNN1DP51172 638 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 MARSP56192 900 aaKnown RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 GUCY2DQ02846 1103 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 HYIQ5T013 277 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PPP1R18Q6NYC8 613 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 CCDC43Q96MW1 224 aaKnown RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 INPP4AQ96PE3 977 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PACSIN1Q9BY11 444 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 LUC7LQ9NQ29 371 aaKnown RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PIM2Q9P1W9 311 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PACSIN2Q9UNF0 486 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 DAGLAQ9Y4D2 1042 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PNMA6FA0A0J9YX94 578 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 GRID2IPA4D2P6 1211 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 E9PMD0 336 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 PAK2Q13177 524 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 RAPGEF1Q13905 1077 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 ADGRF4Q8IZF3 695 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 IQCKQ8N0W5 287 aa20.16■□□□□ 0.82
PCDHA1-202ENST00000394633 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 NPHP3-ACAD11A0A0J9YXS1 232 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 GNA14O95837 355 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 CPP00450 1065 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 KRT14P02533 472 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 ARID5AQ03989 594 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 TADA2BQ86TJ2 420 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 SH2D3CQ8N5H7 860 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 IFT81Q8WYA0 676 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 KRT12Q99456 494 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 GANQ9H2C0 597 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 KCTD10Q9H3F6 313 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 AIPL1Q9NZN9 384 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 PCDHA12Q9UN75 941 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 A0A087WUV0 522 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 EBAG9O00559 213 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 ZNF543Q08ER8 600 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 KIAA0753Q2KHM9 967 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 DACT2Q5SW24 774 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 TTBK2Q6IQ55 1244 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM133AQ8N9E0 248 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 SCFD1Q8WVM8 642 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 CASKIN2Q8WXE0 1202 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 PIK3R5Q8WYR1 880 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 UIMC1Q96RL1 719 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM107BQ9H098 131 aa20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 BMP2KQ9NSY1 1161 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-202ENST00000394633 KDM3AQ9Y4C1 1321 aa20.14■□□□□ 0.82
PCDHA1-202ENST00000394633 ZNF233A6NK53 670 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 MARCH6O60337 910 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 GABPAQ06546 454 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 KLHL30Q0D2K2 578 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 PDCLQ13371 301 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 ENOX2Q16206 610 aaKnown RBP20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 CFAP58Q5T655 872 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 KIAA0825Q8IV33 1275 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 CCDC65Q8IXS2 484 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 ZC3H3Q8IXZ2 948 aaKnown RBP20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 MREGQ8N565 214 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 CUL5Q93034 780 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 NT5C3AQ9H0P0 336 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 ADAMTS1Q9UHI8 967 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 KIAA1024Q9UPX6 916 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 PCDHAC2Q9Y5I4 1007 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 FAM169AQ9Y6X4 670 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 SHTN1A0MZ66 631 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 PLA2G4BP0C869 781 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 ASIC2Q16515 512 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 KCTD16Q68DU8 428 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 RTKN2Q8IZC4 609 aa20.14■□□□□ 0.81
PCDHA1-202ENST00000394633 CLSTN1O94985 981 aa20.13■□□□□ 0.81
PCDHA1-202ENST00000394633 RNASE9P60153 205 aaKnown RBP20.13■□□□□ 0.81
PCDHA1-202ENST00000394633 STRIP1Q5VSL9 837 aa20.13■□□□□ 0.81
PCDHA1-202ENST00000394633 GPBP1Q86WP2 473 aa20.13■□□□□ 0.81
PCDHA1-202ENST00000394633 PSMD1Q99460 953 aa20.13■□□□□ 0.81
PCDHA1-202ENST00000394633 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
PCDHA1-202ENST00000394633 POTEB3A0JP26 581 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 POTECB2RU33 542 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 GCFC2P16383 781 aaKnown RBP20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 CYP11B2P19099 503 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 GUCY2FP51841 1108 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 PICALMQ13492 652 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 TRADDQ15628 312 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 CDC37Q16543 378 aaPredicted RBP20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 DALRD3Q5D0E6 543 aaKnown RBP20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 HERC4Q5GLZ8 1057 aaPredicted RBP20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 POTEBQ6S5H4 581 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 SLF2Q8IX21 1173 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 ATP1A2P50993 1020 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 SUPT20HQ8NEM7 779 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 SUGT1Q9Y2Z0 365 aa20.12■□□□□ 0.81
PCDHA1-202ENST00000394633 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 RAD51CO43502 376 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 TTLL1O95922 423 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 SLC16A2P36021 539 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 MRPL12P52815 198 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms