RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 POTEB3A0JP26 581 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 POTECB2RU33 542 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 MMP14P50281 582 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 USP11P51784 963 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 CLNS1AP54105 237 aaKnown RBP17.08■□□□□ 0.33
PTBP1-204ENST00000394601 TSR1Q2NL82 804 aaKnown RBP17.08■□□□□ 0.33
PTBP1-204ENST00000394601 PDXDC1Q6P996 788 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 POTEBQ6S5H4 581 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 ARL8AQ96BM9 186 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 CEP89Q96ST8 783 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 PANK4Q9NVE7 773 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 NYAP2Q9P242 653 aa17.08■□□□□ 0.33
PTBP1-204ENST00000394601 IDEP14735 1019 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 STAT3P40763 770 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 MYOCDQ8IZQ8 938 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 ZNHIT6Q9NWK9 470 aaKnown RBP17.08■□□□□ 0.32
PTBP1-204ENST00000394601 ESYT3A0FGR9 886 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 RRP1BQ14684 758 aaKnown RBP17.08■□□□□ 0.32
PTBP1-204ENST00000394601 DACT2Q5SW24 774 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 SUGP1Q8IWZ8 645 aaKnown RBP17.08■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC17Q96LX7 622 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
PTBP1-204ENST00000394601 PLA2G4BP0C869 781 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 SPATA31C1P0DKV0 1188 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC84Q86UT8 332 aaPredicted RBP17.07■□□□□ 0.32
PTBP1-204ENST00000394601 TRIM59Q8IWR1 403 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 ANKRD13CQ8N6S4 541 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC114Q96M63 670 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC42Q96M95 316 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 COL4A3BPQ9Y5P4 624 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 TARSL2A2RTX5 802 aaKnown RBP17.07■□□□□ 0.32
PTBP1-204ENST00000394601 MPHOSPH10O00566 681 aaKnown RBP17.07■□□□□ 0.32
PTBP1-204ENST00000394601 MYBL1P10243 752 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 GUCY2FP51841 1108 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 CASP5P51878 434 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 CDC37Q16543 378 aaPredicted RBP17.07■□□□□ 0.32
PTBP1-204ENST00000394601 PTPROQ16827 1216 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 DCAF4Q8WV16 495 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 SNX12Q9UMY4 172 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
PTBP1-204ENST00000394601 PSMC6P62333 389 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 FKBP3Q00688 224 aaKnown RBP17.06■□□□□ 0.32
PTBP1-204ENST00000394601 FAM26FQ5R3K3 315 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 MOXD1Q6UVY6 613 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 RRAGAQ7L523 313 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 IFIH1Q9BYX4 1025 aaKnown RBP17.06■□□□□ 0.32
PTBP1-204ENST00000394601 LRRC27Q9C0I9 530 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 TAL1P17542 331 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-204ENST00000394601 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-204ENST00000394601 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 PLCD4Q9BRC7 762 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 EDEM3Q9BZQ6 932 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 TSGA10Q9BZW7 698 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 MMRN2Q9H8L6 949 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 KDM3AQ9Y4C1 1321 aa17.06■□□□□ 0.32
PTBP1-204ENST00000394601 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 HLA-DOAP06340 250 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 PRLRP16471 622 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 Q4G0T1 1027 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 CEP85LQ5SZL2 805 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.321e-20■□□□□ 8.4
PTBP1-204ENST00000394601 NT5C3AQ9H0P0 336 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 SLC26A4O43511 780 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 MOCS3O95396 460 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 TUBBP07437 444 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 TCP10Q12799 353 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 KIF5AQ12840 1032 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 BCAS3Q9H6U6 928 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 PSME4Q14997 1843 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 HGSO14964 777 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 SNAP25P60880 206 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
PTBP1-204ENST00000394601 GMCL1P1Q8NEA9 526 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 CEP63Q96MT8 703 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
PTBP1-204ENST00000394601 GOLGA6L7A0A1B0GV03 622 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 SSU72P8A0A1W2PR75 194 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 POTEFA5A3E0 1075 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 E7EVH7 732 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms