RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ATG7O95352 703 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 RSPH10BP0C881 870 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 IGBP1P78318 339 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 LENG9Q96B70 501 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 TCEAL9Q9UHQ7 104 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 GBF1Q92538 1859 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 CXCL10P02778 98 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 CTSHP09668 335 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 ATP2A2P16615 1042 aaKnown RBP34.86■■■■□ 3.17
CMTM4-202ENST00000394106 MBTPS1Q14703 1052 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 PLPPR4Q7Z2D5 763 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 GUCD1Q96NT3 240 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 MSRAQ9UJ68 235 aa34.86■■■■□ 3.17
CMTM4-202ENST00000394106 PLCB4Q15147 1175 aa34.85■■■■□ 3.17
CMTM4-202ENST00000394106 NONOQ15233 471 aaKnown RBP eCLIP34.85■■■■□ 3.17
CMTM4-202ENST00000394106 MIS18BP1Q6P0N0 1132 aa34.85■■■■□ 3.17
CMTM4-202ENST00000394106 ABHD15Q6UXT9 468 aa34.85■■■■□ 3.17
CMTM4-202ENST00000394106 KRT25Q7Z3Z0 450 aa34.85■■■■□ 3.17
CMTM4-202ENST00000394106 TUBE1Q9UJT0 475 aa34.85■■■■□ 3.17
CMTM4-202ENST00000394106 TMEM265A0A087WTH1 108 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 FDPSP14324 419 aaKnown RBP34.84■■■■□ 3.17
CMTM4-202ENST00000394106 INSRRP14616 1297 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 RABGGTBP53611 331 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 RAB30Q15771 203 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 FAM160B1Q5W0V3 765 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 CNKSR3Q6P9H4 555 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 RUFY4Q6ZNE9 571 aa34.84■■■■□ 3.17
CMTM4-202ENST00000394106 NSUN7Q8NE18 718 aaKnown RBP34.84■■■■□ 3.17
CMTM4-202ENST00000394106 MSH4O15457 936 aa34.83■■■■□ 3.17
CMTM4-202ENST00000394106 CAND2O75155 1236 aa34.83■■■■□ 3.17
CMTM4-202ENST00000394106 BAIAP3O94812 1187 aa34.83■■■■□ 3.17
CMTM4-202ENST00000394106 ZNF746Q6NUN9 644 aaPredicted RBP34.83■■■■□ 3.17
CMTM4-202ENST00000394106 ZNF302Q9NR11 478 aa34.83■■■■□ 3.17
CMTM4-202ENST00000394106 LIMCH1Q9UPQ0 1083 aa34.83■■■■□ 3.17
CMTM4-202ENST00000394106 IGKV6D-21A0A0A0MT36 114 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 CCDC194A0A1B0GVG4 234 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 TDP2O95551 362 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 KRT76Q01546 638 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 INF2Q27J81 1249 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 TCTN1Q2MV58 587 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 MARCH8Q5T0T0 291 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 SWSAP1Q6NVH7 229 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 CCDC60Q8IWA6 550 aaPredicted RBP34.82■■■■□ 3.16
CMTM4-202ENST00000394106 TNPO1Q92973 898 aaKnown RBP34.82■■■■□ 3.16
CMTM4-202ENST00000394106 KIF2CQ99661 725 aa34.82■■■■□ 3.16
CMTM4-202ENST00000394106 POTEB3A0JP26 581 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 RRN3P2A6NIE6 340 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 JAK2O60674 1132 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 KCNJ6P48051 423 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 TAF2Q6P1X5 1199 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 PDXDC2PQ6P474 469 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 POTEBQ6S5H4 581 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 OXER1Q8TDS5 423 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 ZBTB10Q96DT7 871 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 SLC9A7Q96T83 725 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 NKX2-4Q9H2Z4 354 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 ZNF576Q9H609 170 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 YBX2Q9Y2T7 364 aaKnown RBP34.81■■■■□ 3.16
CMTM4-202ENST00000394106 SAMM50Q9Y512 469 aa34.81■■■■□ 3.16
CMTM4-202ENST00000394106 MBLAC1A4D2B0 266 aaPredicted RBP34.8■■■■□ 3.16
CMTM4-202ENST00000394106 SLC26A2P50443 739 aa34.8■■■■□ 3.16
CMTM4-202ENST00000394106 FOSBP53539 338 aa34.8■■■■□ 3.16
CMTM4-202ENST00000394106 ST3GAL1Q11201 340 aa34.8■■■■□ 3.16
CMTM4-202ENST00000394106 SMAP1Q8IYB5 467 aaPredicted RBP34.8■■■■□ 3.16
CMTM4-202ENST00000394106 TRAPPC12Q8WVT3 735 aa34.8■■■■□ 3.16
CMTM4-202ENST00000394106 GJA10Q969M2 543 aa34.8■■■■□ 3.16
CMTM4-202ENST00000394106 CDX2Q99626 313 aaPredicted RBP34.8■■■■□ 3.16
CMTM4-202ENST00000394106 STXBP5LQ9Y2K9 1186 aa34.8■■■■□ 3.16
CMTM4-202ENST00000394106 GAS7O60861 476 aa34.79■■■■□ 3.16
CMTM4-202ENST00000394106 PSAPP07602 524 aa34.79■■■■□ 3.16
CMTM4-202ENST00000394106 Q4G0T1 1027 aa34.79■■■■□ 3.16
CMTM4-202ENST00000394106 CYP3A7-CYP3A51PA0A087WV96 503 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 MYOGP15173 224 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 CYP3A7P24462 503 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 WDR5P61964 334 aaKnown RBP34.78■■■■□ 3.16
CMTM4-202ENST00000394106 IKBKEQ14164 716 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 LETM2Q2VYF4 491 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 LRCH2Q5VUJ6 765 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 RSPH3Q86UC2 560 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 CKAP2LQ8IYA6 745 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 DNAJB3Q8WWF6 145 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 SLC5A5Q92911 643 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 PCDHA11Q9Y5I1 949 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 PCDHA10Q9Y5I2 948 aa34.78■■■■□ 3.16
CMTM4-202ENST00000394106 CHMP2AO43633 222 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 RBM25P49756 843 aaKnown RBP34.77■■■■□ 3.16
CMTM4-202ENST00000394106 PIK3AP1Q6ZUJ8 805 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 CCDC83Q8IWF9 413 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 DBF4BQ8NFT6 615 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 PHOSPHO2Q8TCD6 241 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 RIT2Q99578 217 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 TEKT3Q9BXF9 490 aa34.77■■■■□ 3.16
CMTM4-202ENST00000394106 FAM49AQ9H0Q0 323 aaPredicted RBP34.77■■■■□ 3.16
CMTM4-202ENST00000394106 DDX25Q9UHL0 483 aaKnown RBP34.77■■■■□ 3.16
CMTM4-202ENST00000394106 ABHD14A-ACY1A0A1B0GW23 586 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 WDR64B1ANS9 1081 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 GRIN2CQ14957 1233 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 FAM26DQ5JW98 314 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 MOXD1Q6UVY6 613 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 ATP8B4Q8TF62 1192 aa34.76■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms