RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PNMA1Q8ND90 353 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 MDM1Q8TC05 714 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 NLRC4Q9NPP4 1024 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 SHBGP04278 402 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 CALML3P27482 149 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 NOVP48745 357 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 DRP2Q13474 957 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 ZDHHC14Q8IZN3 488 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 SLC44A5Q8NCS7 719 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
PDCD4-202ENST00000393104 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 TP73O15350 636 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 ZNF568Q3ZCX4 644 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 C12orf60Q5U649 245 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 PARP9Q8IXQ6 854 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
PDCD4-202ENST00000393104 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 BCAS3Q9H6U6 928 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 CEP72Q9P209 647 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 AKR1B10O60218 316 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 PTK2Q05397 1052 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 PIGWQ7Z7B1 504 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 METTL13Q8N6R0 699 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 C3orf20Q8ND61 904 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 SIX2Q9NPC8 291 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 FBXL5Q9UKA1 691 aa12.53□□□□□ -0.4
PDCD4-202ENST00000393104 RBBP6Q7Z6E9 1792 aaKnown RBP12.53□□□□□ -0.4
PDCD4-202ENST00000393104 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
PDCD4-202ENST00000393104 ZNFX1Q9P2E3 1918 aaKnown RBP12.53□□□□□ -0.4
PDCD4-202ENST00000393104 BBOX1O75936 387 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 SERPING1P05155 500 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 HPDP32754 393 aaPredicted RBP12.52□□□□□ -0.4
PDCD4-202ENST00000393104 ELF3P78545 371 aaPredicted RBP12.52□□□□□ -0.4
PDCD4-202ENST00000393104 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.4
PDCD4-202ENST00000393104 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 DGKHQ86XP1 1220 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 ANKLE1Q8NAG6 615 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 HAS1Q92839 578 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 IQCDQ96DY2 449 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 SGSM3Q96HU1 749 aa12.52□□□□□ -0.4
PDCD4-202ENST00000393104 F8VZ95 297 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 USP11P51784 963 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 DYMQ7RTS9 669 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 KIRREL3Q8IZU9 778 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 SYT11Q9BT88 431 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 AP1M1Q9BXS5 423 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 POTEMA6NI47 508 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
PDCD4-202ENST00000393104 ACTN1P12814 892 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 DNA2P51530 1060 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 KLHL7Q8IXQ5 586 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 ALS2CR12Q96Q35 445 aa12.52□□□□□ -0.41
PDCD4-202ENST00000393104 CELF4Q9BZC1 486 aaKnown RBP12.52□□□□□ -0.41
PDCD4-202ENST00000393104 CCNT1O60563 726 aaKnown RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 DNAJC8O75937 253 aaPredicted RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 KIF4AO95239 1232 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 POLD1P28340 1107 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 TFAP4Q01664 338 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 PTPROQ16827 1216 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 OAS1P00973 400 aaKnown RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 LRRC63Q05C16 580 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 CCDC84Q86UT8 332 aaPredicted RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 DDX12PQ92771 950 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
PDCD4-202ENST00000393104 EBF2Q9HAK2 575 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 ERVK-5Q9HDB9 667 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 DAPK3O43293 454 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 PAX7P23759 505 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 SLC15A2Q16348 729 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 ZDHHC24Q6UX98 284 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 RAD54LQ92698 747 aa12.51□□□□□ -0.41
PDCD4-202ENST00000393104 PPFIA2O75334 1257 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 TDP2O95551 362 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 CASP5P51878 434 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 JAM2P57087 298 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 LETM2Q2VYF4 491 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
PDCD4-202ENST00000393104 AMACRQ9UHK6 382 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
PDCD4-202ENST00000393104 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
PDCD4-202ENST00000393104 ALADP13716 330 aa12.5□□□□□ -0.41
PDCD4-202ENST00000393104 POLR2FP61218 127 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms